Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_L18
(905 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0964 - 7417158-7417517,7417596-7417868,7418400-7418810,741... 31 1.3
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968... 31 1.7
07_01_0119 - 908600-909592,909685-909885 30 2.9
05_04_0142 - 18372751-18373338 29 3.8
11_06_0012 + 19251085-19251666 29 6.7
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343 29 6.7
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.9
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 28 8.9
06_03_0218 + 18219956-18220555 28 8.9
06_01_0078 - 628946-629524,629620-629684,629814-629935,630042-63... 28 8.9
03_06_0149 - 31987183-31987630,31987813-31987874 28 8.9
03_04_0061 - 16949038-16950006 28 8.9
02_04_0270 - 21439788-21441680 28 8.9
>06_01_0964 -
7417158-7417517,7417596-7417868,7418400-7418810,
7419270-7419347
Length = 373
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +2
Query: 524 FFHRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGSSLVRSPVPTLPLTGYLSAFLPSG 703
FF P ++ ++ RS ++ + T + + G SL + LP + Y S P
Sbjct: 94 FFLNDLPGNDFNQLFRSLEKIKTSTTM-----YHKGDSLPSYYISGLPKS-YYSRLFPRQ 147
Query: 704 SVALSHSSRCRYLSSGVGRSLQAG 775
SV L HSS C + S V L+AG
Sbjct: 148 SVHLFHSSYCLHWRSQVPEGLEAG 171
>06_03_0833 -
25196091-25196372,25196464-25196565,25196640-25196838,
25196978-25197278,25197471-25197645,25197842-25198012,
25198207-25198239
Length = 420
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 516 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 674
CWR + T D Q + +KD P + PSC L+F P P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335
>07_01_0119 - 908600-909592,909685-909885
Length = 397
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 848 RGGXKTIVTG*GAAVGLNGGFVHTAQLGANDL 753
RGG + + T GA L G H +LGA+DL
Sbjct: 332 RGGARVVATEVGACEPLRAGVPHWPRLGADDL 363
>05_04_0142 - 18372751-18373338
Length = 195
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 781 TQPSLERTTYTRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL* 602
T S ++Y T + R E+GG G++QGR R+A A R +RL +
Sbjct: 36 TSGSAASSSYPSTSGSAGSSSSGRRVEEEEQGGGGGGRKQGRRRKAVARAIR-ERLPAAV 94
Query: 601 SC 596
+C
Sbjct: 95 AC 96
>11_06_0012 + 19251085-19251666
Length = 193
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 763 RTTYTRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVS 608
RTT T E A R+RH RR+ GG G R R G+ G +V+
Sbjct: 69 RTTATAVEAQQA-LRRRRHGGRRDSGGGAGG-RGSRGGVGDLGSCGGTAIVA 118
>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
Length = 356
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 348 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 503
P PRS RC GCG R Q TQR P N IT E TC ++ P +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 760 FAPSWAVCTNPPFSPTAAPYPVTIVLXPP 846
F P AV PP P AAP PV + + P
Sbjct: 67 FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95
>06_03_0218 + 18219956-18220555
Length = 199
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 703 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 608
+RRE+ + +G KR+GR R G RGKR S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139
>06_01_0078 -
628946-629524,629620-629684,629814-629935,630042-630129,
630508-630819,630908-632189,632296-632784
Length = 978
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 834 DDSYRIRRSGRAERGVRAHSPAWSER-PTPELRYLQ 730
D++ R+RR R + G AH+P W R P RY++
Sbjct: 57 DEAQRLRRERRGQ-GSGAHTPRWVRRTPDQMARYVE 91
>03_06_0149 - 31987183-31987630,31987813-31987874
Length = 169
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 724 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 623
A+ + H R + + +R+GR R AHEG G
Sbjct: 76 AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109
>03_04_0061 - 16949038-16950006
Length = 322
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 598 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 714
RT+K PG+ ++PRA+ + P Y VR + +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293
>02_04_0270 - 21439788-21441680
Length = 630
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 837 QDDSYRIRRSGRAERGVRAHSPAWSERPTPELRYLQR 727
+DDSYR+ R+G RG +S RPT EL +R
Sbjct: 592 EDDSYRMSRNGGQRRG-----DGYSLRPTSELHNSRR 623
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,921,700
Number of Sequences: 37544
Number of extensions: 577120
Number of successful extensions: 1904
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1904
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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