Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L17
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0725 - 20442988-20443180,20443268-20443540,20443642-204438...    32   0.53 
09_04_0734 + 19796297-19796329,19796866-19797129                       29   4.9  
07_03_1175 - 24555965-24556117,24557809-24558264,24558270-245584...    29   4.9  
11_06_0431 - 23424969-23426081                                         29   6.5  
06_03_1506 + 30641428-30642168                                         29   6.5  
02_04_0496 + 23446039-23446964,23452755-23452845,23452946-234529...    29   6.5  
06_03_1047 - 27133869-27134345,27134444-27134701,27134841-271350...    28   8.6  

>08_02_0725 -
           20442988-20443180,20443268-20443540,20443642-20443853,
           20443935-20444247,20444334-20444441,20444537-20444643,
           20444743-20444781
          Length = 414

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 312 TTFTKKSLVALSQSPEDLPSPHFLVPSDKVV 220
           TTF +++  A S +PE+LP P  ++  D+VV
Sbjct: 233 TTFRRRTTAAASPAPEELPLPRKILDHDRVV 263


>09_04_0734 + 19796297-19796329,19796866-19797129
          Length = 98

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 238 DKEMGGGKVFGTLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGP-GGDST 402
           ++E GGG  FG  GE   G  G G     +       LTG   G  V G   GD+T
Sbjct: 35  EEECGGGVSFGAAGEDGHGGDGDGDGVNAYLRFPGPTLTGSGDGGVVGGEVDGDAT 90


>07_03_1175 -
           24555965-24556117,24557809-24558264,24558270-24558436,
           24558468-24558756,24559620-24559726,24559841-24559909,
           24560001-24560109
          Length = 449

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +1

Query: 271 TLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 414
           T  +   G+ G GG+    +    G  +G  YGT   G GG     GG
Sbjct: 106 TANDRAGGIRGGGGFGAGGYGSGGGYSSGGGYGTGEYGRGGGYAGNGG 153


>11_06_0431 - 23424969-23426081
          Length = 370

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +2

Query: 98  LLSAALLXMRERSSFYASWLRREVSDHQPIFKVSLTPSXIFTTLSLGTRKWG 253
           L S A       +SF  S L ++  +HQP+   S + S   T  S  T+ WG
Sbjct: 90  LCSTAAAIGDANASFTISLLDQDDDEHQPVAAHSRSCSSTVTFSSAATKAWG 141


>06_03_1506 + 30641428-30642168
          Length = 246

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFGKG-GYNREFFNDDRGKLTGQAYGTRVLGPGGDSTSYGG 414
           GGG  +G+ G    G +G+G GY         G   G   G+   G GG  + YGG
Sbjct: 73  GGGGGYGSGGGEGNGAYGQGYGYGSGNGGGGGGGYGGGGGGS--YGSGGMGSGYGG 126


>02_04_0496 +
           23446039-23446964,23452755-23452845,23452946-23452996,
           23453080-23453206,23453390-23453425,23453443-23453473,
           23453488-23453576,23454341-23454462,23455601-23455778,
           23458343-23458470,23458592-23458658,23459167-23459272,
           23459365-23459473,23459965-23460084,23460187-23460220,
           23460471-23460547,23460640-23460692,23460847-23460898,
           23461270-23461767
          Length = 964

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
 Frame = +3

Query: 51  VSSSETCHNSKCIPRCCYPLHSLXCVNAQVSMPPGYAEKY---PITSQFSKSV*HPRRYS 221
           V ++E  H  +C+  CC P+    C    + +   Y E +   P  +Q+ K   HP +Y 
Sbjct: 99  VLAAEGSHRRRCLLSCCGPMDPTSCTVLVIDL--AYPELWYCRPGDNQWVKLHQHPYQYR 156

Query: 222 RLCH 233
              H
Sbjct: 157 NPAH 160


>06_03_1047 -
           27133869-27134345,27134444-27134701,27134841-27135041,
           27135242-27135584,27135674-27135732,27136256-27136581,
           27136753-27136849,27137072-27137182,27137691-27138305,
           27139578-27139880
          Length = 929

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 178 PANFQSQSDTLXDIHDFVTWDKEMGGGKVFGTLGESDQ 291
           PA      D + D+    ++D+EMGGG      GE ++
Sbjct: 15  PAAAGGGGDEMEDVRLLDSYDEEMGGGAAAAAAGEEEE 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,958,007
Number of Sequences: 37544
Number of extensions: 453209
Number of successful extensions: 1227
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)