Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L17
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   4.9  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.9  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 337 DRGKLTGQAYGTRVLGPGGDSTSYGG 414
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 442 WRSHWPSLDDHRNWY 398
           W +H P+ D   NWY
Sbjct: 661 WLNHSPNYDQVTNWY 675


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 727 NNFFRQKFYSYF*A*RGKNACLSGTYIAALIMVL 626
           ++FF+Q F+ Y     G+ A  +G YI   + VL
Sbjct: 420 SSFFQQFFHCYCPVRFGRKADPNGDYIRRYLPVL 453


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 217 YRRGCQTDFENWLVIGYF 164
           Y RG + D+E W+  G F
Sbjct: 161 YHRGHRKDYERWVQQGAF 178


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 592 LQAQITHEW*LPTPLSKQLYKCRLDKHSCLVKPRSMNKIFV*KNCYKNRL 741
           L A + H      P +K+LY   L  ++ LV+P  +N   V + C K +L
Sbjct: 14  LSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRP-VVNTSDVLRVCIKLKL 62


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 592 LQAQITHEW*LPTPLSKQLYKCRLDKHSCLVKPRSMNKIFV*KNCYKNRL 741
           L A + H      P +K+LY   L  ++ LV+P  +N   V + C K +L
Sbjct: 14  LSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRP-VVNTSDVLRVCIKLKL 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,709
Number of Sequences: 438
Number of extensions: 5022
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)