Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L15
         (924 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852...    31   1.7  
03_05_0373 + 23581812-23583293                                         30   2.3  
01_01_0401 + 3043634-3043894,3045610-3045849                           30   3.0  
09_04_0194 + 15504780-15506114                                         29   5.2  
03_05_0893 + 28566436-28566501,28566624-28566903,28567002-285671...    29   6.9  
09_03_0165 + 12936028-12936398,12936807-12936810                       28   9.1  
04_04_0243 - 23858975-23860706,23861178-23861230,23861338-238615...    28   9.1  

>03_02_0441 -
           8517501-8517701,8518004-8518139,8519995-8520107,
           8520189-8520284,8520376-8520590,8520675-8520797,
           8520887-8520917,8521020-8521079,8521951-8522106,
           8522185-8522274,8522347-8522562,8522671-8522805,
           8522898-8523401,8523485-8523700,8524411-8524456,
           8524542-8524678,8525059-8525191,8526084-8526358
          Length = 960

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 12  LPXHYRESLKILTHSSVLQSGSHLLRTQLSRQYIMAAKFVVLVSPASLWPKV 167
           LP H + SLK     S+    SHL+R   +    + AK+ V   PA  WP++
Sbjct: 71  LPPHAKASLKQALIDSITIDHSHLVRRASANVVSIIAKYAV---PAGEWPEL 119


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -2

Query: 467 DVQGGPCGAPRPCARCSASTVPKPPW 390
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>01_01_0401 + 3043634-3043894,3045610-3045849
          Length = 166

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 23/75 (30%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
 Frame = -2

Query: 485 GGGVLLDVQGGPCGAPRPCARCSASTVP----KP---PWPCRSXXXXXXXXXXXXXLSCC 327
           GGG    +   P  +P   A+C A  VP    +P   P P R                 C
Sbjct: 23  GGGGGKKLHQSPPPSPPEAAKCCADGVPVVMGEPLGAPAPPRESWNSGVLSCLGRNDEFC 82

Query: 326 STDSEPSFQALLKSC 282
           S+D E SF+A  K C
Sbjct: 83  SSDVEGSFEAFTKQC 97


>09_04_0194 + 15504780-15506114
          Length = 444

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +2

Query: 53  LLCVAVRFASPPHSALSTVHHGRQVRSSRIACIALAQGSDGATRRSRLLQGHRTPHQGV 229
           LL + +   SP H+A +    G Q R +R   +A+    DGATR+       RTP   V
Sbjct: 12  LLLLLLVVVSPCHAAAAAAADGGQ-RPTRPKAVAMPVVRDGATRQYVATFQQRTPRVAV 69


>03_05_0893 +
           28566436-28566501,28566624-28566903,28567002-28567188,
           28567353-28567423,28567523-28567600,28567687-28567774,
           28567875-28567930,28568054-28568121
          Length = 297

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +2

Query: 128 RSSRIACIALAQ--GSDGATRRSRLLQGHRTPHQGVP 232
           RS R+  IA A   GS    RRS  L G  T H+ +P
Sbjct: 77  RSGRLVAIAAAAPAGSASGPRRSARLNGQTTEHKALP 113


>09_03_0165 + 12936028-12936398,12936807-12936810
          Length = 124

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 489 REKLQAAVQNTVQESQKLAKKVSSQRA--GD**ETGAQDQGRLPRLREEHPGGDQEDPGG 662
           R K+++  +  VQ     ++   +QR   G   E G   Q RL R  EE  GG     GG
Sbjct: 37  RIKIKSVREGDVQSPSPGSQGAPAQRLDQGQVGEGGRHAQCRLHRQEEESRGGSSMKGGG 96

Query: 663 RQ 668
           RQ
Sbjct: 97  RQ 98


>04_04_0243 -
           23858975-23860706,23861178-23861230,23861338-23861538,
           23861649-23861990,23862277-23862423,23862945-23863086,
           23863876-23863959,23864772-23864779
          Length = 902

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +2

Query: 80  SPPHSALSTVHHGRQVRSSRIACIALAQGSDGATRRSRLLQGHRTPH-QGVP*DFSNNSL 256
           +PP SA + V    +   +  A +AL +    A +    L     PH  G P    N  L
Sbjct: 372 APPTSAAAAVAAAARASPTSAAALALFKSVLSADKALSPLAV--LPHLDGAPSSLPNLLL 429

Query: 257 TRSPSQRTHRTSARL 301
           T S + R H TS RL
Sbjct: 430 TASAAVRPHATSLRL 444


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,324,233
Number of Sequences: 37544
Number of extensions: 287647
Number of successful extensions: 1049
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)