Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L15
         (924 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.                 33   1.9  
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.               33   1.9  
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.              33   1.9  
AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.              27   9.3  

>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 145  GDTRTTNLAAMMYCRES*VRRRCEPDCNTEEC 50
            G  RT N     YC +     RC+  CNTEEC
Sbjct: 1462 GRERTCNPVYEKYCADHFADGRCDQGCNTEEC 1493


>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 145  GDTRTTNLAAMMYCRES*VRRRCEPDCNTEEC 50
            G  RT N     YC +     RC+  CNTEEC
Sbjct: 1462 GRERTCNPVYEKYCADHFADGRCDQGCNTEEC 1493


>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
          Length = 2281

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 145  GDTRTTNLAAMMYCRES*VRRRCEPDCNTEEC 50
            G  RT N     YC +     RC+  CNTEEC
Sbjct: 1422 GRERTCNPVYEKYCADHFADGRCDQGCNTEEC 1453


>AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.
          Length = 939

 Score = 27.1 bits (57), Expect(2) = 9.3
 Identities = 20/59 (33%), Positives = 24/59 (40%)
 Frame = +2

Query: 110 HHGRQVRSSRIACIALAQGSDGATRRSRLLQGHRTPHQGVP*DFSNNSLTRSPSQRTHR 286
           HH    RS R       + S     RS   + HR P +      S     RSPSQR+HR
Sbjct: 601 HHSPSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERR-HRSPSQRSHR 658



 Score = 21.8 bits (44), Expect(2) = 9.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 263 SPSQRTHRTSAR 298
           SPS+R+HR+ AR
Sbjct: 667 SPSKRSHRSPAR 678


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,650,014
Number of Sequences: 237096
Number of extensions: 1411122
Number of successful extensions: 8738
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8738
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)