Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L02
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical ...    32   0.60 
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical...    31   1.4  
AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical ...    30   1.8  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    29   5.6  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm rece...    29   5.6  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U97009-10|AAC69033.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   7.4  
AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical p...    28   9.8  

>AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical
           protein ZK355.7 protein.
          Length = 170

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
 Frame = +3

Query: 246 SDGKIYTIHA----DINDNRIEKGVYEVDLNLNTTVKILDKGRDLCYDDDSTIYVASNDG 413
           S  K+  IHA     +N++R    +Y  +L     +  L    D  + D   + V  NDG
Sbjct: 5   SKSKVQNIHARYCESLNESRPIYPIYFFNLCYYEKLSTLADDCDAIFGD---VVVDVNDG 61

Query: 414 IYVYKTGDKSFKKYGTFKADVISLTKMNGSD----LFYAVTNDNKAYKVTENGNKYVLDD 581
            Y+YK        +G+ K   I  TK+ G D    L +  + D     V    N Y+   
Sbjct: 62  RYLYKFFGVG-NIFGSLK---IQYTKIEGLDFLLGLDFVGSLDASQTPVLIRSNNYLKQA 117

Query: 582 NLKAVKQVMFDNFNVLHYVTLDNEVFKVKETMEKIDFNVKIDY 710
            L     +  +N  ++ Y      +   +  M +IDF++K+DY
Sbjct: 118 FLLLNNIISANNDQLVMYDNPSLFLNNQQCLMYQIDFDIKMDY 160


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
 Frame = +3

Query: 519 VTNDNKAYKVTENGNKYVLDDNLKAVKQVMFDNFNVLHY-VT--LDNEVFKVKETMEKI- 686
           VT  N AYK  +N N+ + +D  K   +    N  + H  VT  L N+         +  
Sbjct: 226 VTLKNHAYKYHKNLNETIANDTGKPSVKPRSTNITIKHLPVTSSLMNQYLIADRVQRRYC 285

Query: 687 --DFNVKIDYVRLLKSSATEDDAPFS 758
              +N  IDY    K++A+ED  PF+
Sbjct: 286 CCGYNGAIDYGFFNKTTASEDKIPFT 311


>AC024746-13|AAF60407.2|  480|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.12a protein.
          Length = 480

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -1

Query: 511 NKSLPFIFVRLITSALKVPYFLKLLSPVLYTYIPSLLATYIV 386
           N +LP+IF+       +  Y+LK ++ V++  +PSLLA  ++
Sbjct: 42  NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLCVPSLLAMTVL 83


>AF040649-4|ABS19468.1|  152|Caenorhabditis elegans Hypothetical
           protein F33H12.7 protein.
          Length = 152

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 11/35 (31%), Positives = 25/35 (71%)
 Frame = +3

Query: 492 MNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKAV 596
           ++G+D  ++V++ +  Y++   G+KY  DDN++A+
Sbjct: 25  LSGADYLFSVSSGSSTYQI---GDKYSYDDNMEAI 56


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -1

Query: 226 TKAPTT*SSVEYSSTLRCLKTEPLSTLEAVTLSPTTKM 113
           T+APTT + +  +     L+TE L T ++ T++P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 19/55 (34%), Positives = 32/55 (58%)
 Frame = -1

Query: 685 IFSIVSFTLNTSLSKVT*CNTLKLSNITCLTAFKLSSKTYLLPFSVTL*ALLSFV 521
           ++ ++ F +NT  + +T   TLKLS++TC T   LSS   +L  + TL  + S +
Sbjct: 38  VWYLLDFLMNTLTTGIT-FYTLKLSSVTCQTC-ALSSIYLMLENNFTLNIMYSLM 90


>AF101318-2|AAK68599.1|  331|Caenorhabditis elegans Seven tm
           receptor protein 66 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -3

Query: 584 IIIQNVFVTIFSDFVSFIVVCYGVKQIASVHFC*AYNVSFES--TIFFKAFISGFIYIYP 411
           I I N F+T++S    F +  +      SV F   Y   F+S  T FF+ F  G   +YP
Sbjct: 84  INISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYP 137

Query: 410 VIASYVYRAVI 378
           ++    Y + I
Sbjct: 138 LLPGICYASTI 148


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = -3

Query: 707 IDFNIKIDFFHSLFHFKYFIIQSDIVQYIEVIKHNLFDGFQIIIQNVFVTIF 552
           I FN KI FF++ FH  Y  I  D  + I++ K  L D  +  ++NV V ++
Sbjct: 376 IPFNGKITFFNNAFHRLYLNITLD--EDIQIFKTKLDD--EGSLENVSVEVY 423


>Z74041-1|CAA98520.1|  255|Caenorhabditis elegans Hypothetical
           protein T03F7.5 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = -3

Query: 521 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 375
           + ++++ S+ F        + T+FFK F ++GF++      SYVY  VI+
Sbjct: 54  FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98


>U97009-10|AAC69033.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein11 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -3

Query: 677 HSLFHFKYFIIQSDIVQYIEV--IKHNLFDGFQIIIQNVFVTIFSDFVSFIVVCYGVKQI 504
           H  F  K+  ++S I +  +V  I H   D   +I+  +FV+I + ++SF +VC  + +I
Sbjct: 469 HLEFAIKFPNLRSQIPEINQVGPIAHYYLD---VIVFLIFVSIITAYISFQIVCRILSRI 525

Query: 503 AS 498
            S
Sbjct: 526 LS 527


>AC006832-7|AAF39999.1|  505|Caenorhabditis elegans Hypothetical
           protein ZK355.5 protein.
          Length = 505

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
 Frame = +3

Query: 348 LDKGRDLCYDDDSTIYVASNDGIYVYKTGDKSFKKYGTFKADVISLTKMNG----SDLFY 515
           L    + C      + V +NDG Y+YK     +  +GT K   I  +K +G    +DL Y
Sbjct: 352 LSSSEENCTALVGNVVVDANDGRYLYKLFKIKY-IFGTLK---IQYSKSDGLYFLTDLNY 407

Query: 516 AVTNDNKAYKVTENGNKYVLDDNLKAVKQVM 608
               D     V    N Y++  NL  +  ++
Sbjct: 408 IGNLDASIPAVLIRSNNYLIKPNLPVIMNII 438


>Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical
           protein C08F11.13 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 123 VGLSVTASKVLNGSVFRQRSVELYSTEDQVVGAFVISNAEKSDGKIYTIHA 275
           VG     +K  N +++    +++ ST   V+GAF+ S   K+ G+++ I A
Sbjct: 175 VGSHRWMNKYSNSTIWISIILQIASTFTLVIGAFIRSEDPKTSGRMFFIGA 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,824,559
Number of Sequences: 27780
Number of extensions: 331293
Number of successful extensions: 1074
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)