Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_K16
(908 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 38 0.013
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.053
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 36 0.053
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 36 0.053
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.092
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.092
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.092
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.12
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.12
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.49
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.49
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 31 0.86
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 31 0.86
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 31 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 1.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna bin... 30 2.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.6
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.1
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 6.1
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 6.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.0
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.0
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.0
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.0
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.0
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PPG + G P GP+ P PP +P +P P
Sbjct: 158 PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPG----APEHQESQECPRGEPLI 213
Query: 341 XGXPXPPHKGGXXXPP 294
G P PP + G PP
Sbjct: 214 PGEPGPPGEAGPQGPP 229
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -1
Query: 440 PQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
P NP PP P PP+ P P G P PP G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPW---KPCPQGPPGPPGPPGPPGDSGEPGSP 171
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.5 bits (78), Expect = 0.053
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFF-PPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P + PK P P F PP GG P P P PP GG PP
Sbjct: 54 PGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 34.7 bits (76), Expect = 0.092
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = -3
Query: 438 PKPPX--PPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
PKP PP P PP G PP P F P P GG P P
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 32.3 bits (70), Expect = 0.49
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -3
Query: 432 PPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
PP PP F PP G PP P F P PP G P
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMF--GAPPPPPPPSGLGVAP 127
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -2
Query: 463 FFXPXKGXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
FF P PP P PP GG P P G P PP G PP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPM--MGGIPPPPPMFGAPPPP 117
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -2
Query: 463 FFXPXKGXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
F P G P PP PP GG P P F P PP G P
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPM--FGAPPPPPPPSGLGVAP 127
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PPG + G P GP+ P PP +P P G P
Sbjct: 158 PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP--GTPGEPGVP-AQSEPLI 214
Query: 341 XGXPXPPHKGGXXXPP 294
G P PP + G PP
Sbjct: 215 PGEPGPPGEAGPQGPP 230
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 440 PQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
P NP PP P PP P P G P PP G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPC---KPCPQGPPGPPGPPGPPGDSGEPGSP 171
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/76 (30%), Positives = 27/76 (35%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PPG + G P GP+ P PP +P P G P
Sbjct: 158 PPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP--GTPGEPGVP-AQSEPLI 214
Query: 341 XGXPXPPHKGGXXXPP 294
G P PP + G PP
Sbjct: 215 PGEPGPPGEAGPQGPP 230
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 440 PQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
P NP PP P PP P P G P PP G P
Sbjct: 126 PGNPGRPPQQPCEPITPPPC---KPCPQGPPGPPGPPGPPGDSGEPGSP 171
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.092
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 598 PXKPXXPGXXXXXXXXXXXXXXXXXFPPXXGGPPXKXPXPXGAPXGGXKPXKGG 759
P P PG PP GGPP P P G P P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 855 PPGGXPPXXXXXXXXXXXXXXXGPXXKXPPPPXPLXGFXXPXXGPXGXRXFXGGXP 688
PPGG PP P PPPP P G P P F GG P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P G P PP P PP G P P P PP GG P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 390 PPXXXGXPPXPXXFXXSGG-PXXPPQGGXP 304
PP G PP P +GG P PP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXG--GXPXPXXFXXFXG--XPXPPTRGGXXXPP 293
P G P PP P PP G P P G P PP GG PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGG 310
+ G P PP PP P PP PP P F GGP PP G
Sbjct: 754 ISGGPPPPPPP--PGGCPPPPP-----PPPPGGF--KGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 389 PPFXGGXPXPXXXXXXXGXPXPPHKGGXXXP 297
PP GG P P G P PP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Frame = +3
Query: 543 PPPPXGXGXCFLGPPXXPPXK-----TXXPXVXXXXXXXXXXXXXXXXFSPXXGGXPPQK 707
PPPP G GPP PP T P P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 708 XXXPXGPXRG 737
P G +G
Sbjct: 773 PPPPPGGFKG 782
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP G GG P P + PP P PP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP-----PPPPPPGGF 780
Query: 341 XGXPXPPHKGGXXXP 297
G P PP G P
Sbjct: 781 KGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.092
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 598 PXKPXXPGXXXXXXXXXXXXXXXXXFPPXXGGPPXKXPXPXGAPXGGXKPXKGG 759
P P PG PP GGPP P P G P P GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 855 PPGGXPPXXXXXXXXXXXXXXXGPXXKXPPPPXPLXGFXXPXXGPXGXRXFXGGXP 688
PPGG PP P PPPP P G P P F GG P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P G P PP P PP G P P P PP GG P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 390 PPXXXGXPPXPXXFXXSGG-PXXPPQGGXP 304
PP G PP P +GG P PP GG P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 736
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXG--GXPXPXXFXXFXG--XPXPPTRGGXXXPP 293
P G P PP P PP G P P G P PP GG PP
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGG 310
+ G P PP PP P PP PP P F GGP PP G
Sbjct: 754 ISGGPPPPPPP--PGGCPPPPP-----PPPPGGF--KGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 389 PPFXGGXPXPXXXXXXXGXPXPPHKGGXXXP 297
PP GG P P G P PP G P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Frame = +3
Query: 543 PPPPXGXGXCFLGPPXXPPXK-----TXXPXVXXXXXXXXXXXXXXXXFSPXXGGXPPQK 707
PPPP G GPP PP T P P GG PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 708 XXXPXGPXRG 737
P G +G
Sbjct: 773 PPPPPGGFKG 782
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP G GG P P + PP P PP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP-----PPPPPPGGF 780
Query: 341 XGXPXPPHKGGXXXP 297
G P PP G P
Sbjct: 781 KGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.092
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 598 PXKPXXPGXXXXXXXXXXXXXXXXXFPPXXGGPPXKXPXPXGAPXGGXKPXKGG 759
P P PG PP GGPP P P G P P GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 33.1 bits (72), Expect = 0.28
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 855 PPGGXPPXXXXXXXXXXXXXXXGPXXKXPPPPXPLXGFXXPXXGPXGXRXFXGGXP 688
PPGG PP P PPPP P G P P F GG P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P G P PP P PP G P P P PP GG P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 390 PPXXXGXPPXPXXFXXSGG-PXXPPQGGXP 304
PP G PP P +GG P PP GG P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLP 319
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXG--GXPXPXXFXXFXG--XPXPPTRGGXXXPP 293
P G P PP P PP G P P G P PP GG PP
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGG 310
+ G P PP PP P PP PP P F GGP PP G
Sbjct: 337 ISGGPPPPPPP--PGGCPPPPP-----PPPPGGF--KGGPPPPPPPG 374
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 389 PPFXGGXPXPXXXXXXXGXPXPPHKGGXXXP 297
PP GG P P G P PP G P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/70 (28%), Positives = 21/70 (30%), Gaps = 5/70 (7%)
Frame = +3
Query: 543 PPPPXGXGXCFLGPPXXPPXK-----TXXPXVXXXXXXXXXXXXXXXXFSPXXGGXPPQK 707
PPPP G GPP PP T P P GG PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 708 XXXPXGPXRG 737
P G +G
Sbjct: 356 PPPPPGGFKG 365
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP G GG P P + PP P PP P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP-----PPPPPPGGF 363
Query: 341 XGXPXPPHKGGXXXP 297
G P PP G P
Sbjct: 364 KGGPPPPPPPGMFAP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
L G PP PP PP G PP P +G P PP GG P P
Sbjct: 249 LAGSGSPPPPPAAGSP----PPPRTGSPPPPP----TGSPPPPPAGGSPPPP 292
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 454 PXKGXPKTPXX--PPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P KG P PP P PP G P P G P PP GG PP
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT-----GSPPPPPAGGSPPPP 292
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP GG P P P P SP PP GG P P
Sbjct: 272 PPPPPTGSPPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP----AG 325
Query: 341 XGXPXPP 321
G P PP
Sbjct: 326 TGSPPPP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
L G PP PP PP G PP P +G P PP GG P P
Sbjct: 270 LAGSGSPPPPPAAGSP----PPPRTGSPPPPP----TGSPPPPPAGGSPPPP 313
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 454 PXKGXPKTPXX--PPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P KG P PP P PP G P P G P PP GG PP
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT-----GSPPPPPAGGSPPPP 313
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP GG P P P P SP PP GG P P
Sbjct: 293 PPPPPTGSPPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP----AG 346
Query: 341 XGXPXPP 321
G P PP
Sbjct: 347 TGSPPPP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/52 (38%), Positives = 21/52 (40%)
Frame = -3
Query: 450 LKGXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
L G PP PP PP G PP P +G P PP GG P P
Sbjct: 255 LAGSGSPPPPPAAGSP----PPPRTGSPPPPP----TGSPPPPPAGGSPPPP 298
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 454 PXKGXPKTPXX--PPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPPTRGGXXXPP 293
P KG P PP P PP G P P G P PP GG PP
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPT-----GSPPPPPAGGSPPPP 298
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
PP PP GG P P P P SP PP GG P P
Sbjct: 278 PPPPPTGSPPPPPAGGSPP--PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP----AG 331
Query: 341 XGXPXPP 321
G P PP
Sbjct: 332 TGSPPPP 338
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 445 GXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPP 320
G P P PP P F PP G P P + G PP
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -3
Query: 444 GXPKPPXPPXFPXXXX-FFPPXXXGXPPXPXXFXXSGGPXXPP 319
G PP PP +P +PP PP P P PP
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 445 GXPKTPXXPPXPXXXXFFPPXXXGGXPXPXXFXXFXGXPXPP 320
G P P PP P F PP G P P + G PP
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Frame = -3
Query: 444 GXPKPPXPPXFPXXXX-FFPPXXXGXPPXPXXFXXSGGPXXPP 319
G PP PP +P +PP PP P P PP
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 341 EXXKXXGXGGXPXXXGGKKXXXXGXWGGXGGFGXP 445
E K G GG GG+ G GG GGFG P
Sbjct: 253 EEKKEGGEGGGRGGRGGRGGFRGGFRGGRGGFGGP 287
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 341 EXXKXXGXGGXPXXXGGKKXXXXGXWGGXGGFGXP 445
E K G GG GG+ G GG GGFG P
Sbjct: 253 EEKKEGGEGGGRGGRGGRGGFRGGFRGGRGGFGGP 287
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXGGXP---XPXXFXXFXGXPXPPTRGGXXXPP 293
P G P P PP P PP G P P + G P P G PP
Sbjct: 122 PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPP 178
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = -2
Query: 454 PXKGXPKTPXXPPXPXXXXFFPPXXXGGXP---XPXXFXXFXGXPXPPTRGGXXXPP 293
P G P P PP P PP G P P + G P P G PP
Sbjct: 122 PFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPP 178
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1
Query: 295 GGXXXPPLWGGXGXPXXXKXXXGXGXPPXXGGEKXXXXGEXGGXXGFWGP 444
GG PP GG G P G G PP GG G+ GG G GP
Sbjct: 169 GGMGGPPGHGGMGGP---PGHGGQGGPPGHGGMGGPPPGQ-GGPGGPGGP 214
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 309 PPLVGGXGXPXXXXXXXGXGXPPXKXG-GKKXXXXGXGGXXG 431
PPL+GG G P G G PP G G G GG G
Sbjct: 155 PPLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGGPPG 194
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +1
Query: 295 GGXXXPPLWGGXGXPXXXKXXXGXGXPPXXGGEKXXXXGEXGGXXGFWGP 444
GG PP GG G P G G PP GG G+ GG G GP
Sbjct: 449 GGMGGPPGHGGMGGP---PGHGGQGGPPGHGGMGGPPPGQ-GGPGGPGGP 494
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 309 PPLVGGXGXPXXXXXXXGXGXPPXKXG-GKKXXXXGXGGXXG 431
PPL+GG G P G G PP G G G GG G
Sbjct: 435 PPLMGGGGDP--RGPPGGMGGPPGHGGMGGPPGHGGQGGPPG 474
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -1
Query: 446 RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXP 297
RGP P P P PP P P G P P H G P
Sbjct: 76 RGPPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPP 125
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 3/78 (3%)
Frame = +1
Query: 295 GGXXXPPLWGGXGXPXXXKXXXGXGXPPXXGGEKXXXXGEXGGXXGFWGPL*XGXKXXXX 474
G PP G P G G PP G G G G +GP G
Sbjct: 388 GAFAPPP--SAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
Query: 475 PP---XPXFFSPXPGGXG 519
PP P +P PG G
Sbjct: 446 PPPTGFPPVGAPPPGAAG 463
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -3
Query: 444 GXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
G P P PP P P G P P G P P + G P P
Sbjct: 262 GPPGPIGPPGQPGAPGSSQPGPQGPPGDPGIDGAPGNPGSPGEPGPPGQP 311
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 615 GXGFXGGXXGGGPKNXPPXPXGGG 544
G G GG GGG PP P GGG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 29.9 bits (64), Expect = 2.6
Identities = 32/123 (26%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = -3
Query: 906 GPXGGLXGGXXXXGFXXPPGGXPPXXXXXXXXXXXXXXXGPXXKXPPPPXPLXGFXXPXX 727
G GG GG G G PP G PPP P G
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
Query: 726 GPXGXRX--FXGGXPXGGGKXXXXXXXXXXXXXXPXXPXGXGFXGGXXGGGPKNXPPXPX 553
G G GG GGG G G GG GGG
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
Query: 552 GGG 544
GGG
Sbjct: 148 GGG 150
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 615 GXGFXGGXXGGGPKNXPPXPXGGG 544
G G GG GGG PP P GGG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 29.9 bits (64), Expect = 2.6
Identities = 32/123 (26%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = -3
Query: 906 GPXGGLXGGXXXXGFXXPPGGXPPXXXXXXXXXXXXXXXGPXXKXPPPPXPLXGFXXPXX 727
G GG GG G G PP G PPP P G
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGG 87
Query: 726 GPXGXRX--FXGGXPXGGGKXXXXXXXXXXXXXXPXXPXGXGFXGGXXGGGPKNXPPXPX 553
G G GG GGG G G GG GGG
Sbjct: 88 GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGC 147
Query: 552 GGG 544
GGG
Sbjct: 148 GGG 150
>AF000197-7|AAU20839.1| 445|Caenorhabditis elegans Star (rna
binding protein) familyprotein 2, isoform c protein.
Length = 445
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 543 PPPPXGXGXCFLGPPXXPPXKTXXP 617
PPPP G F+GP PP T P
Sbjct: 25 PPPPNDSGHEFIGPSSGPPQVTITP 49
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -3
Query: 771 PPPPXPLXGFXXPXXGPXGXRXFXGGXPXGGGKXXXXXXXXXXXXXXPXXPXGXGFXGGX 592
PPPP P G G GG GGG G G GG
Sbjct: 54 PPPPPPACGGGCGGGG--------GGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGC 105
Query: 591 XGGGPKNXPPXPXGGG 544
GG PP GGG
Sbjct: 106 GGGCAPPPPPPACGGG 121
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXX 342
P PPG G L P GP+ P + PP GG P P
Sbjct: 139 PEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGPA--GPPGPGGKPGPAGPPGE 196
Query: 341 XGXPXPPHKGGXXXP 297
G P G P
Sbjct: 197 NGRNGEPQPGSPGEP 211
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFF--SPPFXGGXPXPXXXX 348
PP PG + G G L R P+ P P P PP G P P
Sbjct: 97 PPGTPGRAGRP-GKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNK 155
Query: 347 XXXGXPXPPHKGG 309
G P PP G
Sbjct: 156 GPLGPPGPPGPEG 168
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/78 (29%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFF--SPPFXGGXPXPXXXX 348
PP PG + G G L R P+ P P P PP G P P
Sbjct: 99 PPGTPGSAGRP-GKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNK 157
Query: 347 XXXGXPXPPHKGGXXXPP 294
G P PP G P
Sbjct: 158 GPLGPPGPPGPEGPNGEP 175
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 440 PQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
P +P PP SP PP P P G P P K G PP
Sbjct: 127 PGHPGKPPQSPCEPLTPPPCPACPPGP------PGAPGAPGKPGSEGPP 169
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = -3
Query: 444 GXPKPPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGGXPXXP 295
G P PP PP P G P P GGP P G P
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGP 304
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 432 PPXPPXFPXXXXFFPPXXXGXPPXPXXFXXSGGPXXPPQGG 310
PP PP P PP PP P P PP GG
Sbjct: 562 PPPPPPLPQNLSGAPP----PPPPPPPMLGGPPPPPPPPGG 598
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +1
Query: 580 APPXXPPXKPXXPGXXXXXXXXXXXXXXXXXFPPXXG--GPPXKXPXPXGAPXGGXKPXK 753
A P PP PG P G GPP P P GAP GG P
Sbjct: 139 AGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP-PGPDGAPGGGSGPGP 197
Query: 754 GG 759
G
Sbjct: 198 AG 199
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -1
Query: 443 GPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
GP P P S P G P P G P PP G P
Sbjct: 183 GPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGSNGIDGAP 232
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +1
Query: 580 APPXXPPXKPXXPGXXXXXXXXXXXXXXXXXFPPXXG--GPPXKXPXPXGAPXGGXKPXK 753
A P PP PG P G GPP P P GAP GG P
Sbjct: 139 AGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGPAGPPGP-PGPDGAPGGGSGPGP 197
Query: 754 GG 759
G
Sbjct: 198 AG 199
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +1
Query: 583 PPXXPPXKPXXPGXXXXXXXXXXXXXXXXXFPPXXGGPPXKX--PXPXGAPXGGXKPXKG 756
P PP KP PG P GG P P GAP G +P +
Sbjct: 149 PVTVPPCKPCPPGPAGEPGHDGAPGAPGKPGAPGVGGGSGAPGAPGPKGAPGGPGQPGRD 208
Query: 757 G 759
G
Sbjct: 209 G 209
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 615 GXGFXGGXXGGGPKNXPPXPXGGG 544
G G GG GP PP P GGG
Sbjct: 14 GAGGGGGGPPRGPPQQPPQPQGGG 37
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -1
Query: 485 GXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGX 306
G G P GP P P P SP G P G P P G
Sbjct: 212 GPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGT 271
Query: 305 XXPP 294
PP
Sbjct: 272 AGPP 275
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 6/81 (7%)
Frame = -1
Query: 518 PXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXX------PPXSPXXXFFSPPFXGGXPXPX 357
P PG G P RGP P P P S P G P
Sbjct: 164 PGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEP 223
Query: 356 XXXXXXGXPXPPHKGGXXXPP 294
G P PP G PP
Sbjct: 224 GDSGPPGPPGPPGAPGNDGPP 244
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/105 (23%), Positives = 30/105 (28%)
Frame = -1
Query: 608 GFXGGXXGGAQKTXXXXXXXXXXXXXGXXPPXPPGXGEKKXGXGGXXXLFXPX*RGPQNP 429
G+ G GG+ T P PG K G P + P +P
Sbjct: 48 GYDAGVNGGSASTGGCDACCLPGAAGPAGTPGKPGRPGKPGAPGLPGNPGHPP-QQPCDP 106
Query: 428 XXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGXXXPP 294
PP PP G P P G P P + G P
Sbjct: 107 ITPPPCQPCPQ-GPPGPPGPPGPSGDAGGNGNPGSPGQDGQPGAP 150
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = -1
Query: 485 GXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXXGXPXPPHKGGX 306
G G P GP P P P SP G P G P P G
Sbjct: 211 GPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGT 270
Query: 305 XXPP 294
PP
Sbjct: 271 AGPP 274
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 6/81 (7%)
Frame = -1
Query: 518 PXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXX------PPXSPXXXFFSPPFXGGXPXPX 357
P PG G P RGP P P P S P G P
Sbjct: 159 PGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEP 218
Query: 356 XXXXXXGXPXPPHKGGXXXPP 294
G P PP G PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPP 239
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 4/80 (5%)
Frame = -1
Query: 521 PPXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXG----GXPXPXX 354
PP PG G P GP+ P PP SP P G P
Sbjct: 163 PPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAP-GEPGRPGDDAPSEPLIPG 221
Query: 353 XXXXXGXPXPPHKGGXXXPP 294
G P PP + G P
Sbjct: 222 EPGPQGPPGPPGQAGPDGQP 241
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 6/81 (7%)
Frame = -1
Query: 518 PXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXX------PPXSPXXXFFSPPFXGGXPXPX 357
P PG G P RGP P P P S P G P
Sbjct: 159 PGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEP 218
Query: 356 XXXXXXGXPXPPHKGGXXXPP 294
G P PP G PP
Sbjct: 219 GDSGPPGPPGPPGAPGNDGPP 239
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/70 (25%), Positives = 22/70 (31%)
Frame = -1
Query: 518 PXPPGXGEKKXGXGGXXXLFXPX*RGPQNPXXPPXSPXXXFFSPPFXGGXPXPXXXXXXX 339
P PG + + G GG P GP P P ++ P G P P
Sbjct: 215 PGAPGP-DGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPPGPPGKD 273
Query: 338 GXPXPPHKGG 309
G P G
Sbjct: 274 GEAGPDGPAG 283
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,097,406
Number of Sequences: 27780
Number of extensions: 303656
Number of successful extensions: 1630
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1329
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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