Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_K09
         (891 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma...    28   1.6  
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce...    28   1.6  
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    27   3.6  
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc...    27   3.6  
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy...    27   4.7  
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces...    26   6.3  
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch...    26   8.3  

>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 506

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = -3

Query: 733 VFNIYFLCISLYLVAKVSSLYVFTSFIF 650
           +F I+ LC+SL+LV  ++   ++  F+F
Sbjct: 232 LFGIFVLCVSLFLVNIIADRILYGRFVF 259


>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2104

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 648  KKMKEVKT*SDETLATRYKEIHKKYILKTRDY 743
            KK+  +K   ++T++++YKE+ K Y+    DY
Sbjct: 951  KKLSSIKK-DEQTISSKYKELEKDYLNIMADY 981


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
            Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 748  IL*SLVFNIYFLCISLYLVAKVSSLYVFTSFIFL-MSRQWIXRV 620
            IL SLV NIY L     + A   +L   T+F  L  SR WI RV
Sbjct: 2021 ILHSLVPNIYALSTPFIIYATAFALAGLTTFSSLGDSRLWISRV 2064


>SPBC30D10.10c |tor1||phosphatidylinositol kinase
            Tor1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2335

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +1

Query: 235  VVKQRKLDNYTAPSSPDDEIMVEIGVPQQSPEHSLEAAEWYWGDITRDEANEKLR 399
            VVK+ K    T P S  DE++ ++ V Q S + + E+++     +TRD+  + +R
Sbjct: 1083 VVKEFKPRPSTKPFSTQDEVLTKLPVDQASLKAAWESSQ----KLTRDDWQDWIR 1133


>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 424

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -3

Query: 715 LCISLYLVAKVSSLYVFTSFIFLMSRQWIXRV*CLDYCYM 596
           +C S+YL+      +++ +F+ LM   ++  V    +CY+
Sbjct: 117 VCTSIYLLGASCMEFIWDNFLQLMFAAYVFSVVLCTFCYV 156


>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 3699

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 500 ILINLFAPPFLTVNVYPLSLLDALR 426
           +L+ LF   F+TVNV+P    + LR
Sbjct: 720 VLLRLFKLAFMTVNVFPEKNAEVLR 744


>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 297

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 361 GDITRDEANEKLRDTRDGTFLVRNASNKDSGYTL 462
           G ++  +   +L +      L+R ASNK+SG ++
Sbjct: 44  GSVSPSKVLRRLENATSKPILIRGASNKESGVSI 77


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,144,643
Number of Sequences: 5004
Number of extensions: 61480
Number of successful extensions: 150
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)