Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_K03
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1000 - 23220878-23221821,23222164-23223001                      130   1e-30
05_04_0319 + 20171486-20171800,20171882-20171956,20172160-201721...   110   2e-24
03_02_0187 - 6248226-6249226,6249296-6250148                          109   2e-24
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348...    82   7e-16
05_01_0121 - 833885-833949,834180-834430,834545-834604,834893-83...    58   9e-09
03_05_0799 + 27809301-27811550                                         31   1.2  
06_03_0662 - 23229957-23230204,23231021-23231160,23231257-232313...    30   2.1  
02_05_0839 - 32113992-32114210,32114321-32114484,32114612-321147...    30   2.1  
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841...    29   3.7  
01_06_0714 + 31413195-31413221,31414238-31414786                       29   3.7  
01_01_0421 + 3181139-3184207                                           29   3.7  
05_04_0031 + 17353292-17354353                                         29   6.5  
04_03_0980 + 21406822-21409496,21410322-21410376                       29   6.5  
01_07_0284 - 42472309-42472359,42472778-42472864,42473384-424734...    28   8.6  

>07_03_1000 - 23220878-23221821,23222164-23223001
          Length = 593

 Score =  130 bits (314), Expect = 1e-30
 Identities = 79/238 (33%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
 Frame = +2

Query: 194 IWPRPQMQSIEIPYYKFD-SDVLEIKVMDHDCPILSNAVQRSLAVLRDMLR-IASPYVNR 367
           +WP+P   S   P+     S    +     +  +LS A + +  +L +  R + +P VN 
Sbjct: 35  VWPKPTSMSWAEPHMAVRVSSSFHVVAPSGNAHLLSAARRYAALLLAERYRPLVTPAVNV 94

Query: 368 NAPQQVLDDDTYDGPLKSLSIYLTSPCEEYPHFGMIESYNLTI---AADSTLRSSSIWGI 538
            A             L  L++ ++       H G+ ESY L I    A +T+ +++ WG 
Sbjct: 95  TAGGAGAGAAGRGAELGYLTLAVSDLHAPLQH-GVDESYALEILPAGAAATVTAATAWGA 153

Query: 539 LRGLESWTHLFHLSDNRDQLHINKG-EVHDFPRYPHRGLLVDTSRHYISMSNILLILDAM 715
           +RGLE+++ L         + +  G  V D P YPHRGL++DT R Y  +++IL  +DAM
Sbjct: 154 MRGLETFSQLAWWCGRERAVLVAAGVRVEDRPLYPHRGLMLDTGRTYFPVADILRTIDAM 213

Query: 716 AMNKMNVFHWHIVDDQSFPYQSERXPDLSRXGSLSRDLDFTKKEIXTVIDYARNRGIR 889
           A NKMNVFHWHI D QSFP +    P L+  GS    + +T  ++  ++D+A NRG+R
Sbjct: 214 AANKMNVFHWHITDSQSFPLELPSEPALAEKGSYGDGMRYTVDDVKLIVDFAMNRGVR 271


>05_04_0319 +
           20171486-20171800,20171882-20171956,20172160-20172195,
           20172302-20172413,20173082-20173152,20173287-20173417,
           20173718-20173783,20174003-20174103,20174311-20174370,
           20174463-20174496,20174852-20174950,20175019-20175078,
           20175700-20175874,20175900-20175950,20176603-20176632
          Length = 471

 Score =  110 bits (264), Expect = 2e-24
 Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 7/165 (4%)
 Frame = +2

Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADST-----LRSSSIWGILRGLESWTHL--F 571
           L  +++ +  P +E  +FG+ ESYNL++ A  +     + + +++G L  LE+++ L  F
Sbjct: 92  LAGVNVVVHLPGDEL-NFGVDESYNLSVPATGSPIYAQIEAQTVFGALHALETFSQLCNF 150

Query: 572 HLSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHI 751
             +    +L      + D PR+P+RGLL+DTSRHY+ +  I  ++D+M  +K+NV HWHI
Sbjct: 151 DFTSRLIELQSAPWSITDMPRFPYRGLLIDTSRHYLPVPVIKSVIDSMTYSKLNVLHWHI 210

Query: 752 VDDQSFPYQSERXPDLSRXGSLSRDLDFTKKEIXTVIDYARNRGI 886
           VD+QSFP +    P L   G+ S    +T  +   ++ YA  RG+
Sbjct: 211 VDEQSFPIEIPSYPKLWN-GAYSYSERYTMDDAIDIVQYAERRGV 254


>03_02_0187 - 6248226-6249226,6249296-6250148
          Length = 617

 Score =  109 bits (263), Expect = 2e-24
 Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
 Frame = +2

Query: 167 PEYPASKGAIWPRPQMQSIEIPYYKFDSDVLEIK-VMDHDCPILSNAVQRSLAVLRDMLR 343
           P   A K  +WP+P   S     Y   S    ++ V+ H  P L  AV     ++R    
Sbjct: 39  PPLLAQKVQVWPKPTSISWPSAVYAPLSPSFSVRAVLSH--PSLRQAVAFYTRLIR---- 92

Query: 344 IASPYVNRNAPQQVLDDDTYDG-PLKSLSIYLTSPCEEYPHFGMI-ESYNLTIAADS--- 508
                  R+AP     + T    P+++L++ ++ P  + P    + ESY L++  DS   
Sbjct: 93  -----AERHAPLVPPANYTLSRVPVRTLTLSVSDP--DVPLGPAVDESYTLSVLPDSGSA 145

Query: 509 TLRSSSIWGILRGLESWTHLFHLSDNR---DQLHINKG-EVHDFPRYPHRGLLVDTSRHY 676
            + +++ WG +RGLE+++ L           Q  +  G E+ D P + HRG+L+DT+R++
Sbjct: 146 DISAATPWGAIRGLETFSQLAWAGGGAASGGQPIVPSGIEISDRPHFTHRGILLDTARNF 205

Query: 677 ISMSNILLILDAMAMNKMNVFHWHIVDDQSFPYQSERXPDLSRXGSLSRDLDFTKKEIXT 856
             + +IL  L AMA NK+NVFHWHI D QSFP      P+L+  GS S  + +T+ ++  
Sbjct: 206 YPVRDILHTLRAMAFNKLNVFHWHITDAQSFPIVLPTVPNLANSGSYSPTMRYTENDVRH 265

Query: 857 VIDYARNRGIR 889
           ++ +A + GIR
Sbjct: 266 IVSFAASFGIR 276


>01_06_1626 -
           38734128-38734160,38734386-38734560,38734819-38734878,
           38734961-38735059,38735191-38735224,38735315-38735374,
           38735596-38735696,38735949-38736014,38736695-38736825,
           38736946-38737038,38737273-38737338,38737459-38737494,
           38738308-38738382,38738475-38738792
          Length = 448

 Score = 81.8 bits (193), Expect = 7e-16
 Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
 Frame = +2

Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTI-AADSTLR----SSSIWGILRGLESWTHLF-H 574
           L  +++ + SP +E   FG+ ESYNL++  A   LR    + +++G L  L++ + L   
Sbjct: 93  LTGVNVVVHSPEDELK-FGVDESYNLSVPTAGYPLRVQIEAQTVFGALHALQNSSRLLGE 151

Query: 575 LSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHIV 754
              ++D L        DF     R L  DTSRHY+ ++ I  ++D MA +K+NV HWHIV
Sbjct: 152 FLTHQDFL------TEDFLLDQMR-LHADTSRHYLPVTVIKKVIDTMAYSKLNVLHWHIV 204

Query: 755 DDQSFPYQSERXPDLSRXGSLSRDLDFTKKEIXTVIDYARNRGI 886
           D QSFP +    P L   GS S    +T  +   ++ YA NRG+
Sbjct: 205 DAQSFPIEIPSYPKLWN-GSYSFSERYTTSDAVDIVRYAENRGV 247


>05_01_0121 -
           833885-833949,834180-834430,834545-834604,834893-834926,
           835746-835805,836409-836509,836939-837039,837209-837289,
           837580-837650,837738-837849,838138-838173,838865-838951,
           839055-839396
          Length = 466

 Score = 58.0 bits (134), Expect = 9e-09
 Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 11/110 (10%)
 Frame = +2

Query: 434 LTSPCEEYPHFGMIESYNLTIAA---------DSTLRSSSIWGILRGLESWTHL--FHLS 580
           + +  +E    G+ ESY + +AA          +T+ +++I+G +RGLE+++ L  F+  
Sbjct: 107 VVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGAIRGLETFSQLCVFNYD 166

Query: 581 DNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKM 730
               ++      + D PR+  RGLL+DTSRH++ +  I  ++D+M+ +K+
Sbjct: 167 TKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVIKQVIDSMSFSKL 216


>03_05_0799 + 27809301-27811550
          Length = 749

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 266 KVMDHDCPILSNAVQRSLAVLRDMLRIASPYVNR 367
           KV++H  P++  A   SLAVLR +L + S  VNR
Sbjct: 90  KVLEHRTPLMVAATYGSLAVLRLLLSLPSVDVNR 123


>06_03_0662 -
           23229957-23230204,23231021-23231160,23231257-23231394,
           23231501-23231676,23232071-23232152,23233531-23233666,
           23237028-23237145
          Length = 345

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 461 HFGMIESYNL--TIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKG 613
           HFG+++SY++  T+ + S    S    I+ G + W H+F      +++  NKG
Sbjct: 217 HFGLVKSYDMPCTVESASLEPKSGSKFIVGGEDMWVHVFDFFTG-EEITCNKG 268


>02_05_0839 -
           32113992-32114210,32114321-32114484,32114612-32114708,
           32115822-32115944,32116770-32117141
          Length = 324

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +2

Query: 227 IPYYKFDSDVLEIKVMDHDCPILSNAVQRSLAVLRD-MLRIASPYVNRNAPQQVLDDDTY 403
           IPYY FD  V +++ +       SN V+R ++ LRD + R   P +    P +V+ +   
Sbjct: 143 IPYYSFDQFVRKVEKVG-----ASNRVRRCVSELRDRVARGGDPTLLHEPPVEVIPEGEP 197

Query: 404 DG 409
           DG
Sbjct: 198 DG 199


>02_05_1317 -
           35683659-35683756,35683904-35683966,35684068-35684182,
           35684385-35684486,35684687-35684756,35684878-35684952,
           35685188-35685279,35685386-35685493,35685560-35685640,
           35685728-35685771,35685858-35685984
          Length = 324

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 392 HLRPVVGHCGLHTDSRFGA 336
           HL P V HCG H++  FGA
Sbjct: 117 HLLPGVYHCGYHSEDSFGA 135


>01_06_0714 + 31413195-31413221,31414238-31414786
          Length = 191

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 265 NFKYITIKFVVRNFYRLHLRSWPNCTF 185
           NF ++ +   +R   RL +R WPNC F
Sbjct: 76  NFAWLLLHNRLRTADRLQIRQWPNCYF 102


>01_01_0421 + 3181139-3184207
          Length = 1022

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
 Frame = +2

Query: 413 LKSLSIYLTSPCEEYPHFGMIESYNLTIAADSTLRSSSIWGI--LRGLESWTHLFHLSDN 586
           L  L++Y  +   E P       +NLT      L S+S  G   L    +  +LF L+ +
Sbjct: 441 LTKLALYACNLFGEIPR----HIFNLTQLDTIFLHSNSFTGTVELASFLTLPNLFDLNLS 496

Query: 587 RDQLHINKGEVHD-FPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHI 751
            ++L +  GE +     +P+ G L  +S +     NIL  L+   +N +++ H HI
Sbjct: 497 HNKLTVINGESNSSLTSFPNIGYLGLSSCNMTRFPNILKHLNKNEVNGIDLSHNHI 552


>05_04_0031 + 17353292-17354353
          Length = 353

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +2

Query: 479 SYNLTIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKGEVHDFPRYPHRGLLV 658
           S+ L+    + L +S   G    +  W    H  + R  + + +G  HDFPR   R  L 
Sbjct: 232 SWTLSREQGNKLLASRFRGDRLYICDWPGCVHAEERRKYM-VFRGVFHDFPRSQVRRALR 290

Query: 659 DTSRHYISM 685
           DT R  +++
Sbjct: 291 DTRRPTVAV 299


>04_03_0980 + 21406822-21409496,21410322-21410376
          Length = 909

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 232 RNFYRLHLRSWPNCTFRCWIFGSRFHDMQTGH 137
           +N   LHLRS P   F   ++ S F D++T H
Sbjct: 734 QNLQHLHLRSCPRLQFVLPVWASSFPDLKTLH 765


>01_07_0284 -
           42472309-42472359,42472778-42472864,42473384-42473449,
           42474608-42474712,42475129-42475200,42475421-42475543
          Length = 167

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 731 NVFHWHIVDDQSFPYQSERXPDLSRXGSLSRDLDFTKKEIXTVIDYARNRGIR 889
           N   W  +DD    YQ     D  +   + RDLD TK  +   ID   +RG R
Sbjct: 85  NTQPWQYLDDALTKYQDPAEAD--KLLKIQRDLDETKIILHKTIDSVLSRGER 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,807,597
Number of Sequences: 37544
Number of extensions: 484210
Number of successful extensions: 1107
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)