Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_J11
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0486 + 19577507-19577568,19578119-19578218,19581128-195812... 93 4e-19
11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338 92 5e-19
03_06_0123 - 31821915-31822094,31822187-31822324,31822413-318228... 92 5e-19
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 33 0.42
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.3
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 3.9
07_01_0080 + 587674-588510 29 5.2
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 5.2
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 29 6.8
06_02_0196 - 12898050-12898553,12898689-12900824 29 6.8
01_01_0401 + 3043634-3043894,3045610-3045849 29 6.8
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 28 9.0
02_05_0686 - 30900748-30902167,30903442-30904742 24 9.5
>12_02_0486 +
19577507-19577568,19578119-19578218,19581128-19581214,
19581852-19581914
Length = 103
Score = 92.7 bits (220), Expect = 4e-19
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 288
MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL CRQCFR A DIGF K+
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKV 55
>11_06_0483 + 24118047-24118108,24118952-24119051,24119330-24119338
Length = 56
Score = 92.3 bits (219), Expect = 5e-19
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL CRQCFR A DIGF K
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54
>03_06_0123 -
31821915-31822094,31822187-31822324,31822413-31822817,
31822897-31823212,31823305-31823543,31823800-31823903,
31823987-31824145,31824326-31824510,31825318-31825427,
31826900-31826947,31827047-31827241,31827354-31827422,
31829521-31829620,31829879-31829940
Length = 769
Score = 92.3 bits (219), Expect = 5e-19
Identities = 38/54 (70%), Positives = 41/54 (75%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
MGH+N+W SHP+ YG GSR CR C N HGLIRKYGL CRQCFR A DIGF K
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIK 54
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 32.7 bits (71), Expect = 0.42
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 6/54 (11%)
Frame = -1
Query: 786 PFPPPXXXGXXGFFXXGXGXGX-QXXXPPXPGG-----GGXFXXXXKPPPXPPP 643
P PPP + G G G + PP GG GG KPPP PPP
Sbjct: 126 PPPPPKPKPCECTYCGGHGGGCNKPAVPPCAGGCSISDGGACGASCKPPPPPPP 179
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = -1
Query: 807 PLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
P+ G P PP G G G PP P G G PP P P
Sbjct: 1153 PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAP 1207
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -1
Query: 708 PPXP--GGGGXFXXXXKPPPXPPP 643
PP P GGGG PPP PPP
Sbjct: 28 PPIPSCGGGGGGAGPTPPPPPPPP 51
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 708 PPXPGGGGXFXXXXKPPPXPPPXXG 634
PP GG G F PPP PPP G
Sbjct: 79 PPRLGGDGMF-RRPPPPPPPPPSSG 102
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 720 QXXXPPXPGGGGXFXXXXKPPPXPP 646
Q PP GGGG PPP PP
Sbjct: 16 QHPPPPQAGGGGGGEFYRGPPPQPP 40
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = -1
Query: 783 FPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
+PP G + G PP PG G F +P PPP
Sbjct: 60 YPPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQGYFNQGQQPYYPPPP 106
>06_02_0196 - 12898050-12898553,12898689-12900824
Length = 879
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 193 RIGMTEILVRICEGENTKYLRGPF*EIKLFLAN--EQQIRYTFKMANLNEKS 44
R+GM L R+C+ L G +IK+ L N E++IRY K KS
Sbjct: 101 RMGMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKS 152
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 708 PPXPGGGGXFXXXXKPPPXPP 646
PP GGGG PPP PP
Sbjct: 19 PPGGGGGGGKKLHQSPPPSPP 39
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 708 PPXPGGGGXFXXXXKPPPXPPP 643
P PGG +PPP PPP
Sbjct: 12 PLHPGGSSSLLPRKRPPPSPPP 33
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 9.5
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 838 PPXFXGXPXXPPXXGXKXXPP 776
PP G P PP G PP
Sbjct: 347 PPPAKGPPPPPPPKGPSPPPP 367
Score = 22.6 bits (46), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 670 GKTPPXPXPXXGKK 629
G +PP P P GKK
Sbjct: 361 GPSPPPPPPPGGKK 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,046,923
Number of Sequences: 37544
Number of extensions: 348752
Number of successful extensions: 2338
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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