Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_J11
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80953-1|AAB52557.2| 56|Caenorhabditis elegans Ribosomal prote... 101 5e-22
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.38
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.38
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.38
Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear recep... 31 1.1
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical ... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 30 2.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 30 2.7
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 28 8.1
>U80953-1|AAB52557.2| 56|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 29 protein.
Length = 56
Score = 101 bits (243), Expect = 5e-22
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MG N+W+SHPR++G GSRSCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 837 PPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPP 658
PP PL G P PPP PP P GG P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 657 PXPPPXXG 634
P PPP G
Sbjct: 298 PPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 837 PPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPP 658
PP PL G P PPP PP P GG P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 657 PXPPPXXG 634
P PPP G
Sbjct: 319 PPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = -1
Query: 837 PPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPP 658
PP PL G P PPP PP P GG P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 657 PXPPPXXG 634
P PPP G
Sbjct: 304 PPPPPPRG 311
>Z72504-3|CAA96605.1| 449|Caenorhabditis elegans Hypothetical
protein C29E6.5 protein.
Length = 449
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 184 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
CR C R+ + +G++ICR C + + KK
Sbjct: 47 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 80
>AF273784-1|AAG15133.1| 459|Caenorhabditis elegans nuclear receptor
NHR-43 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 184 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
CR C R+ + +G++ICR C + + KK
Sbjct: 57 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 738 GXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXGKXKKK 619
G G G G GG + PPP PPP G +KK
Sbjct: 42 GCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPPQCGCGRKK 81
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = -1
Query: 807 PLXGXXXPFP--PPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
P+ G P P PP G G PP P GG PPP PPP G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -1
Query: 843 GFPPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXK 664
G PP P+ G P PPP G PP PGG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPPPGGC-------- 768
Query: 663 PPPXPPPXXGKXK 625
PPP PPP G K
Sbjct: 769 PPPPPPPPPGGFK 781
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = -1
Query: 807 PLXGXXXPFP--PPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
P+ G P P PP G G PP P GG PPP PPP G
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -1
Query: 843 GFPPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXK 664
G PP P+ G P PPP G PP PGG
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPPPGGC-------- 768
Query: 663 PPPXPPPXXGKXK 625
PPP PPP G K
Sbjct: 769 PPPPPPPPPGGFK 781
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = -1
Query: 807 PLXGXXXPFP--PPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
P+ G P P PP G G PP P GG PPP PPP G
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -1
Query: 843 GFPPXLXXXXFXPLXGXXXPFPPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXK 664
G PP P+ G P PPP G PP PGG
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPIS--------GGPPPPPPPPGGC-------- 351
Query: 663 PPPXPPPXXGKXK 625
PPP PPP G K
Sbjct: 352 PPPPPPPPPGGFK 364
>AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.9 protein.
Length = 250
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 207 MPVGAGSA*PRSLSVSARVRIPNICVAHFKKLNCFSLTSNKLDTPSRWRT 58
M A S PR+ + + N + +LNC S+T ++ ++P+ WRT
Sbjct: 93 MKTAAASTCPRTCGLCCQTEAYNCPNVAYPRLNCASITLSQCNSPA-WRT 141
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 738 GXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
G G G GGGG PPP PPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 762 GXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
G G+ G G G GGG + PP PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 738 GXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
G G G GGGG PPP PPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = -1
Query: 762 GXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPP 643
G G+ G G G GGG + PP PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPP 307
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 753 GFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
G++ G G PP G GG PPP PPP G
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFM----PPPPPPPPMPG 684
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 780 PPPXXXGXXGFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
PPP G G + G G PP PGG G + PPP P G
Sbjct: 412 PPPGGPGAPGSYGPPQG-GPGGFGPPPPGGPGAYG----PPPTGFPPVG 455
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = -1
Query: 753 GFFXXGXGXGXQXXXPPXPGGGGXFXXXXKPPPXPPPXXG 634
G++ G G PP G GG PPP PPP G
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFM----PPPPPPPPMPG 684
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 183 MPILLQQAWLNPQVRFEHMQTVLQRVCS*HRIQE 284
M I + + WL+P ++F+H+ Q + H++ E
Sbjct: 101 MDIYINEMWLDPALKFDHLNPCKQNLSVSHQVLE 134
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 183 MPILLQQAWLNPQVRFEHMQTVLQRV 260
+ +L Q W +P++RF+H+ LQ +
Sbjct: 80 LDLLFSQIWHDPRLRFDHLTNCLQNL 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,848,806
Number of Sequences: 27780
Number of extensions: 244114
Number of successful extensions: 1241
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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