Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_J06
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    31   1.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   3.0  
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385...    29   3.9  
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701...    28   9.0  
02_04_0400 - 22608519-22608844,22609044-22609122                       28   9.0  

>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +3

Query: 426 PXPXGXGVXFLGPXPXPPPXXPXP 497
           P P G    FL P P PPP  P P
Sbjct: 42  PPPQGAPPPFLAPPPPPPPGPPPP 65


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +1

Query: 427 PXPXEXGFXFWXPXPFPPXXXPGPXXSGXGXGXPXPXG 540
           P P   G     P P PP     P   G G G P P G
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375


>10_08_0614 -
           19238064-19238132,19238381-19238407,19238436-19238510,
           19238637-19239317,19239423-19239554,19239676-19239723,
           19239828-19239878,19240015-19240134,19241121-19241261,
           19241701-19241865,19241981-19242160,19242314-19242445,
           19242536-19242643,19242779-19242883,19243217-19243321,
           19243407-19243463,19243991-19244010,19244299-19244377,
           19245021-19245080,19245562-19245615,19246535-19246600,
           19246938-19246990,19247361-19247450,19248152-19248249,
           19248348-19248721
          Length = 1029

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = +3

Query: 375 FXGXGGGXGGFXXXKKXPXPXGXGVXFLGPXPXPPPXXPXP 497
           F G GGG GG                 +GP P PP   P P
Sbjct: 58  FFGGGGGSGGGSRSTTPGRRGSSSSSLVGPVPSPPSPVPFP 98


>06_03_1121 +
           27767707-27768065,27768612-27769034,27770013-27770175,
           27770271-27770381,27770895-27770963,27771117-27771203,
           27771967-27772752
          Length = 665

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/59 (30%), Positives = 20/59 (33%)
 Frame = -1

Query: 562 FXGKPXXPXXGXXNXXPXXXXXGXGXXGGGXGXGPKXXTPFPXGXGXFLXXXXPPXPPP 386
           F G+P  P              G G   GG G G       P G   F+    PP PPP
Sbjct: 537 FPGRPPQPGGMFPMGLEMMMGPGRGPLMGGLGMGGPGRPNRPVGMAPFM----PPPPPP 591


>02_04_0400 - 22608519-22608844,22609044-22609122
          Length = 134

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 497 GPGXXXGGXGXGXQKXNPXSXGXGGFFXXXKXXXXPPGXG 378
           G G   GG G G         G GG++        PPG G
Sbjct: 68  GGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGGYYPPGPG 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,406,125
Number of Sequences: 37544
Number of extensions: 244191
Number of successful extensions: 1146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)