Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_I23
(944 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical... 31 1.6
AF040649-4|ABS19468.1| 152|Caenorhabditis elegans Hypothetical ... 30 2.1
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm rece... 29 6.4
Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical pr... 28 8.5
U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf (diva... 28 8.5
U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf (diva... 28 8.5
AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.5
>AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical
protein Y110A2AL.12a protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 509 NKSLPFIFVRLITSALKVPYFLKLLSPVLYTYIPSLLATYIV 384
N +LP+IF+ + Y+LK ++ V++ +PSLLA ++
Sbjct: 42 NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLCVPSLLAMTVL 83
>AF040649-4|ABS19468.1| 152|Caenorhabditis elegans Hypothetical
protein F33H12.7 protein.
Length = 152
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/35 (31%), Positives = 25/35 (71%)
Frame = +1
Query: 490 MNGSDLFYAVTNDNKAYKVTENGNKYVLDDNLKAV 594
++G+D ++V++ + Y++ G+KY DDN++A+
Sbjct: 25 LSGADYLFSVSSGSSTYQI---GDKYSYDDNMEAI 56
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1
Query: 224 TKAPTT*SSVEYSSTLRCLKTEPLSTLEAVTLSPTTKM 111
T+APTT + + + L+TE L T ++ T++P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 1 TXFXYRSHYREFLKI*VLLHVLAKGNWMSKMNAATLLIFVVGLSVTASKVLNGSVF 168
T F Y S +E+L V + AK +++ MN + I+ + + + K+L+ VF
Sbjct: 377 TAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQMDMDDESDKLLDTVVF 432
>AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm
receptor protein 66 protein.
Length = 331
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -3
Query: 582 IIIQNVFVTIFSDFVSFIVVCYGVKQIASVHFC*AYNVSFES--TIFFKAFISGFIYIYP 409
I I N F+T++S F + + SV F Y F+S T FF+ F G +YP
Sbjct: 84 INISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYP 137
Query: 408 VIASYVYRAVI 376
++ Y + I
Sbjct: 138 LLPGICYASTI 148
>Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical
protein T03F7.5 protein.
Length = 255
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 519 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 373
+ ++++ S+ F + T+FFK F ++GF++ SYVY VI+
Sbjct: 54 FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98
>U23525-7|AAC46569.1| 557|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
a protein.
Length = 557
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -3
Query: 762 RVTKRKGVIFSALDFKSLTYRFNIKIDFXQSLFHFKYFIIQSDIVQYI--EVIKHNLFDG 589
R++ R GV+ S + Y+F ++ + I+ SD+ + I + L G
Sbjct: 106 RMSARLGVV-SGKHMAEVAYQFYPRLPRIILWLMIEIAIVCSDMQEVIGTAIAIFLLSKG 164
Query: 588 FQIIIQNVFVTIFSDFVSFIVVCYGVKQI 502
F + VF+TI F ++ YG++++
Sbjct: 165 FVPLYVGVFITILDTFTFLLIDRYGIRKL 193
>U23525-6|AAU05559.1| 471|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 1, isoform
b protein.
Length = 471
Score = 28.3 bits (60), Expect = 8.5
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -3
Query: 762 RVTKRKGVIFSALDFKSLTYRFNIKIDFXQSLFHFKYFIIQSDIVQYI--EVIKHNLFDG 589
R++ R GV+ S + Y+F ++ + I+ SD+ + I + L G
Sbjct: 106 RMSARLGVV-SGKHMAEVAYQFYPRLPRIILWLMIEIAIVCSDMQEVIGTAIAIFLLSKG 164
Query: 588 FQIIIQNVFVTIFSDFVSFIVVCYGVKQI 502
F + VF+TI F ++ YG++++
Sbjct: 165 FVPLYVGVFITILDTFTFLLIDRYGIRKL 193
>AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical
protein ZK355.5 protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.5
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +1
Query: 346 LDKGRDLCYDDDSTIYVASNDGIYVYKTGDKSFKKYGTFKADVISLTKMNG----SDLFY 513
L + C + V +NDG Y+YK + +GT K I +K +G +DL Y
Sbjct: 352 LSSSEENCTALVGNVVVDANDGRYLYKLFKIKY-IFGTLK---IQYSKSDGLYFLTDLNY 407
Query: 514 AVTNDNKAYKVTENGNKYVLDDNLKAVKQVM 606
D V N Y++ NL + ++
Sbjct: 408 IGNLDASIPAVLIRSNNYLIKPNLPVIMNII 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,440,477
Number of Sequences: 27780
Number of extensions: 332811
Number of successful extensions: 996
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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