Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_I20
(1007 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 4e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.016
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 33 0.048
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.084
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.11
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.34
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.65
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.8
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 28 2.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.5
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 5.5
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 26 9.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 26 9.7
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 40.3 bits (90), Expect = 4e-04
Identities = 26/71 (36%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -3
Query: 987 RGXXTGGXGXXXXGGGVXPXGXKWXKGSXLXXGXXGXGGGRGXFXGG-XRXXGXXRPXGX 811
RG GG G G G P G G G GG G F GG G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 810 APXGXGGGXGG 778
P G GGG GG
Sbjct: 243 GPGGFGGGLGG 253
Score = 35.5 bits (78), Expect = 0.012
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 5/81 (6%)
Frame = -3
Query: 1005 GGGXXPRGXXTGGXGXXXXG----GGVXPXGXKWXKGSXLXXGXXGXGGGRGXFXGGXRX 838
GGG G +GG G GG G G G GG G F GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 837 XGXXRPX-GXAPXGXGGGXGG 778
G G P G GGG GG
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.34
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 481 GXGGGGGGXXRXGXGXXNPRGXXXRLXGXXXGXPPGXXXAPGGPGG 618
G GGG GG G G G G P G PGG GG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.5 bits (63), Expect = 0.78
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 481 GXGGGGGGXXRX--GXGXXNPRGXXXRLXGXXXGXPPGXXXAPGGPGGXXGXTREAGG 648
G GGG GG G G G G G G GGPGG G GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG 249
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 481 GXGGGGGGXXRXGXGXXNPRGXXXRLXGXXXGXPPGXXXAPGGPGGXXG 627
G GG GGG G G G G G GGPGG G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.009
Identities = 23/72 (31%), Positives = 26/72 (36%)
Frame = +2
Query: 788 PPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXSPX 967
P P P GA P + P PP P+P P P + P G P P
Sbjct: 1113 PVPAPSGAPPVPK--PSVAAPPV--PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 968 PPVXXPRGXXPP 1003
PPV P PP
Sbjct: 1169 PPVPAPSSGIPP 1180
Score = 32.7 bits (71), Expect = 0.084
Identities = 24/76 (31%), Positives = 25/76 (32%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXX 958
PP P P A P + P PP P P P P P G P P
Sbjct: 1092 PPVPKPS-VAAPPVPK--PSVAVPPVPAPSGAPPVPKPSVAAPPVP--VPSGAPPVPKPS 1146
Query: 959 SPXPPVXXPRGXXPPP 1006
PPV P G P P
Sbjct: 1147 VAAPPVPAPSGAPPVP 1162
Score = 32.7 bits (71), Expect = 0.084
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPP-PXX 955
PP PPP P P PP P P P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPK----PSVGVPPVPPPSTAPPVPTPSAGLPPVP--VPTAKAPPVPAP 1242
Query: 956 XSPXPPVXXPRGXXPPP 1006
S P V PR P P
Sbjct: 1243 SSEAPSVSTPRSSVPSP 1259
Score = 31.5 bits (68), Expect = 0.19
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +2
Query: 779 PPXPPPX---PXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
PP P P P P P + P+PPP P P T PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 950 XXX--SPXPPVXXPRGXXPP 1003
+ PPV P PP
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPP 1238
Score = 31.1 bits (67), Expect = 0.26
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = +2
Query: 788 PPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXSPX 967
P P P GA P + P PP P P P P G P P +
Sbjct: 1132 PVPVPSGAPPVPK--PSVAAPPVPAPSGAPPVPKPSVAAPPVPA-PSSGIPPVPKPAAGV 1188
Query: 968 PPVXXPRGXXPPP 1006
PPV P P P
Sbjct: 1189 PPVPPPSEAPPVP 1201
Score = 30.7 bits (66), Expect = 0.34
Identities = 21/75 (28%), Positives = 23/75 (30%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXX 958
P PPP P + PP P P P P + P PP
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPV--PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 959 SPXPPVXXPRGXXPP 1003
S PPV P PP
Sbjct: 1118 SGAPPVPKPSVAAPP 1132
Score = 29.5 bits (63), Expect = 0.78
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 555 PXXXXPGVGVPRXPPXXPPPPPPXP 481
P P VGVP PP PP P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 3/79 (3%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXP-LPPPX--PXXPXXNXEPXXHFXPXGXTPPP 949
P PP P + P P P +P P P P + P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
PPV P G P P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVP 1124
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = +2
Query: 791 PPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXSPXP 970
PP P A P PP P P P + P G P P + P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKP-SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Query: 971 PVXXPRGXXP 1000
PV P P
Sbjct: 1238 PVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 555 PXXXXPGVGVPRXPPXXPPPPPPXP 481
P P GVP PP PP P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKP 1203
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.016
Identities = 26/76 (34%), Positives = 28/76 (36%), Gaps = 1/76 (1%)
Frame = +2
Query: 782 PXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXS 961
P PPP P + R P LPPP P P N P G + PP
Sbjct: 311 PPPPPPPSRRN---RGKPPIGNGSSNSSLPPPPPP-PRSNAAGSIPLPPQGRSAPP---- 362
Query: 962 PXPPVXXP-RGXXPPP 1006
P PP P G PPP
Sbjct: 363 PPPPRSAPSTGRQPPP 378
Score = 29.5 bits (63), Expect = 0.78
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXX 958
PP PP + P P PLPP P P P P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP-----PLPAGMPAAPPLPPAAP 474
Query: 959 SPXPPVXXPRGXXP 1000
+P PP P P
Sbjct: 475 AP-PPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -3
Query: 531 GVPRXPPXXP--PPPPPXPGXCXRSPXA 454
G+P PP P P PPP P +P A
Sbjct: 462 GMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
Score = 27.5 bits (58), Expect = 3.2
Identities = 21/76 (27%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +2
Query: 788 PPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXT-PPPXXXSP 964
PPP P A GR P P P P P + T PP P
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 965 XPPVXXPRGXXP--PP 1006
P P P PP
Sbjct: 422 SLPPSAPPSLPPSAPP 437
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTP----P 946
PP PP P P R P P PPP P + P P P
Sbjct: 230 PPIPPSIPSSR-------PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Query: 947 PXXXSPXPPVXXP 985
+ PP+ P
Sbjct: 283 AINSTSKPPLPPP 295
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -1
Query: 647 PPASRVXPXXPPGPPGAXXXPGGXPXXXP 561
PP++ + P P G P A P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 200 HHEPGEHMPPPPMHHKPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 256 GEHMPPPPMHHEPGEHMPP 274
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 213 HHKPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 269 GEHMPPPPMHHEPGEHMPP 287
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 226 HHEPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 282 GEHMPPPPMHHEPGEHMPP 300
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 239 HHEPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 295 GEHMPPPPMHHEPGEHMPP 313
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 252 HHEPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 308 GEHMPPPPMHHEPGEHMPP 326
Score = 33.5 bits (73), Expect = 0.048
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 265 HHEPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 950 XXXSPXPPVXXPRGXXPPP 1006
P PP+ G PP
Sbjct: 321 GEHMPPPPMHHEPGEHMPP 339
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 770 HXXPPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPP 949
H P P P H G P PP P P + EP H P P
Sbjct: 278 HHEPGEHMPPPPMHHEPGEHMP----PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Query: 950 XXXSPXPP 973
P PP
Sbjct: 334 GEHMPPPP 341
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.084
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = +2
Query: 788 PPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXSPX 967
PP P A P P PP P PP P P P PPP S
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPA---------GPPSAPPPPLPASSA 1740
Query: 968 PPVXXP 985
P V P
Sbjct: 1741 PSVPNP 1746
Score = 29.5 bits (63), Expect = 0.78
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 782 PXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXP 892
P PPP P P P PP P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.11
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXX 958
P PPP P A P + PP LPPP P P P P
Sbjct: 147 PSIPPPSPASAPPI-----PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKV 201
Query: 959 SPXP 970
P P
Sbjct: 202 PPPP 205
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/57 (28%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +2
Query: 779 PPXP---PPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXT 940
PP P PP P P + + PP LP P P P P T
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANT 214
Score = 26.6 bits (56), Expect = 5.5
Identities = 22/80 (27%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Frame = +2
Query: 782 PXPPPXPXGAHPXGRXXPXXRXPPXXX----PLPPPXPXXPXXNXEPXXHFXPXGXTP-P 946
P PP P P PP P+P P P P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 947 PXXXSPXPPVXXPRGXXPPP 1006
P S PP+ P PPP
Sbjct: 188 PSLPSAVPPM--PPKVPPPP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.34
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 516 PPXXPPPPPPXPG 478
PP PPPPPP PG
Sbjct: 5 PPGNPPPPPPPPG 17
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 561 PXPXXXXPGVGVPRXPPXXPPPPP 490
P P PG P PP PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPP--PPPPP 30
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 555 PXXXXPGVGVPRXPPXXPPPPPPXPG 478
P P P P PPPPP PG
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 925 PXGXNPPPXXXXPPXPSPXXPRXXPPP 1005
P G NPPP P P P PPP
Sbjct: 5 PPG-NPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/75 (25%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +2
Query: 788 PPPX--PXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXXS 961
PPP P A P PP P PP EP ++ P +
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 962 PXPPVXXPRGXXPPP 1006
P P PPP
Sbjct: 227 YTPKQADPLPAPPPP 241
Score = 24.6 bits (51), Expect(2) = 0.65
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -3
Query: 555 PXXXXPGVGVPRXPPXXPPPPPP 487
P P +P PPPPPP
Sbjct: 174 PSAAAPATSLPSDYNPPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 0.65
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 504 PPPPPPXP 481
PPPPPP P
Sbjct: 190 PPPPPPPP 197
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 561 PXPXXXXPGVGVPRXPPXXPPPPPPXPGXCXRSP 460
P P V P PPPPPP PG P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP 775
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 561 PXPXXXXPGVGVPRXPPXXPPPPPPXPG 478
P P PGV PP PPPP G
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 26.2 bits (55), Expect = 7.3
Identities = 20/76 (26%), Positives = 21/76 (27%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXPXXNXEPXXHFXPXGXTPPPXXX 958
PP PPP P P P+PPP P P PPP
Sbjct: 732 PPPPPPAVIVPTPA----------PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Query: 959 SPXPPVXXPRGXXPPP 1006
P R P P
Sbjct: 782 PPAVSAGGSRYYAPAP 797
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 540 PGVGVPRXPPXXPPPPPPXPGXCXRSP 460
P + VP P P PPP PG SP
Sbjct: 275 PMMNVPMGPGGAPLVPPPPPGMVMASP 301
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -3
Query: 516 PPXXPPPPPPXPGXCXRSPXAGGXXXFXGR 427
P PPPPPP P + F GR
Sbjct: 1091 PSAVPPPPPPPPAEVEKKDLYLALYDFAGR 1120
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +2
Query: 779 PPXPPPXPXGAHPXGRXXPXXRXPPXXXPLPPPXPXXP 892
PP P P P R P + P P+ P P P
Sbjct: 139 PPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLP 176
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -2
Query: 877 GGGQGGXXGGXPXXXXXSASGVXPXGXGG 791
GG GG G P +A G P G G
Sbjct: 612 GGAPGGMPGAAPGAAPGAAPGAAPGGDNG 640
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 504 PPPPPPXPGXCXRSP 460
PPPPPP P SP
Sbjct: 370 PPPPPPPPELLNHSP 384
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,725,563
Number of Sequences: 5004
Number of extensions: 20299
Number of successful extensions: 305
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 523262732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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