Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_I19
(884 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.094
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.22
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.38
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.1 bits (82), Expect = 0.003
Identities = 39/171 (22%), Positives = 40/171 (23%)
Frame = +2
Query: 359 GXPPPPXXXIXXPXPGPRXGGXXXXPPSAXGRXXGVGXXGAXPVPGXXTRXPRXFXCXXX 538
G PP P P P P PS GA PVP P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA-PSGAPPVPKPSVAAP---PVPVP 1136
Query: 539 GGAXXGLXTXXPKPXXPEEKXLXXSPPKAXTKKSXXXGVYXXPPPPAXXXXXPPPXPRXG 718
GA P P P + PP P PP P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 719 XPXXTKKXPXPXPXXPPPXXAPX*XPXXXXXPPPXXTQXEXXAPXPXXPNP 871
P K P PP P P P P T P P P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/70 (24%), Positives = 19/70 (27%)
Frame = +2
Query: 665 PPPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXAPX*XPXXXXXPPPXXTQXEXX 844
PP PA P P P P P P P P P P +
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 845 APXPXXPNPL 874
P P P+
Sbjct: 1210 VPPPSTAPPV 1219
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.094
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 665 PPPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXAPX*XPXXXXXPP 817
PPPPA P P P P P P PPP A P PP
Sbjct: 734 PPPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 614 PPKAXTKKSXXXGVYXXPPPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXA 781
PP A + PPP PPP P P P P P PP A
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPPPPPPAVSA 787
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/67 (31%), Positives = 22/67 (32%)
Frame = +2
Query: 668 PPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXAPX*XPXXXXXPPPXXTQXEXXA 847
PPPA P P G T P P P PP P P PP A
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP----SAPPSLPMGAPAA 446
Query: 848 PXPXXPN 868
P P P+
Sbjct: 447 P-PLPPS 452
Score = 29.9 bits (64), Expect = 0.50
Identities = 41/186 (22%), Positives = 48/186 (25%), Gaps = 7/186 (3%)
Frame = +2
Query: 329 PXGXPXXRGGGXPP----PPXXXIXXPXPGPRXGGXXXXPPSAXGRXXGVGXXGAXPVPG 496
P P R G PP + P P PR P GR A P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGR-------SAPPPPP 365
Query: 497 XXTRXPRXFXCXXXGGAXXGLXTXXPKPXXPEEKXLXXSPPKAXTKKSXXXGVYXXPPPP 676
+ + P P P + PP ++ V P PP
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG-RSAPALPPLGNASRTSTPPV---PTPP 421
Query: 677 AXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXAPX*X---PXXXXXPPPXXTQXEXXA 847
+ PP P P P P P AP P PP A
Sbjct: 422 SLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Query: 848 PXPXXP 865
P P P
Sbjct: 482 PAPAAP 487
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/75 (26%), Positives = 21/75 (28%), Gaps = 6/75 (8%)
Frame = +1
Query: 664 APPPRXPXXXSPPXXKXGXPXXXKKNXXPXPLXXXPXPRPXLKXXXXPXXP------PPX 825
APPP P +P G P P P P L P P PP
Sbjct: 390 APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Query: 826 NPXRKXXPFXPXPQP 870
P P P P
Sbjct: 450 PPSAPIAPPLPAGMP 464
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.38
Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 5/75 (6%)
Frame = +2
Query: 611 SPPKAXTKKSXXXGVYXXPPPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPP-----PX 775
S P T +S PP P+ PPP P P +K P P PP P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSI----PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 776 XAPX*XPXXXXXPPP 820
+P P PP
Sbjct: 182 KSPPSAPSLPSAVPP 196
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/64 (26%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +2
Query: 674 PAXXXXXPPPXPRXGXPXXTKKXPXPXPX---XPPPXXAPX*XPXXXXXPPPXXTQXEXX 844
PA PP P+ P P P PPP P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 845 APXP 856
P P
Sbjct: 1743 VPNP 1746
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/83 (24%), Positives = 23/83 (27%)
Frame = +2
Query: 617 PKAXTKKSXXXGVYXXPPPPAXXXXXPPPXPRXGXPXXTKKXPXPXPXXPPPXXAPX*XP 796
PKA + P PPA PP P P P P AP
Sbjct: 1460 PKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP---- 1515
Query: 797 XXXXXPPPXXTQXEXXAPXPXXP 865
PP + +P P P
Sbjct: 1516 -SSTLPPSQSSFAHVPSPAPPAP 1537
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,608,030
Number of Sequences: 5004
Number of extensions: 21294
Number of successful extensions: 156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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