Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_I09
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1660 + 38966999-38967001,38967685-38967757,38967841-389679...   178   4e-45
01_06_1659 + 38961637-38961639,38962361-38962433,38962531-389626...   177   1e-44

>01_06_1660 +
           38966999-38967001,38967685-38967757,38967841-38967923,
           38968042-38968168,38968260-38968339,38968428-38968544,
           38968711-38968845,38969046-38969215,38969300-38969417
          Length = 301

 Score =  178 bits (434), Expect = 4e-45
 Identities = 98/222 (44%), Positives = 130/222 (58%)
 Frame = +2

Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
           QDKNKYNTPKYR +   +NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAA
Sbjct: 40  QDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAA 96

Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
           Y TG                          +Y VEP D     FR  LDVGL RTTTG R
Sbjct: 97  YCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNR 155

Query: 584 VFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDXX 763
           VFGA+KGA+DGGL++PHS KRF G   + +K         +++     +YMRS+ +++  
Sbjct: 156 VFGALKGALDGGLDIPHSDKRFAGF-KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPE 214

Query: 764 ILSXDNSTKYINLGVPADAIEAIYKKXP*XPXVRIPPXXRKS 889
                + ++Y+  G+ AD +EA+YKK      +R  P   KS
Sbjct: 215 KFQA-HFSEYLKKGIDADGMEALYKKV--HAAIRADPTMAKS 253



 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 111 GFVKVVKNKQYFKRYQVKF 167
           GFVK  K   Y KR+QVKF
Sbjct: 3   GFVKTQKTNAYHKRFQVKF 21



 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 118 LKL*RTNNTSRGTK*NSXRRREGKTDYYARKRL 216
           +K  +TN   +  +    RRR+GKTDY AR RL
Sbjct: 5   VKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRL 37


>01_06_1659 +
           38961637-38961639,38962361-38962433,38962531-38962613,
           38962732-38962858,38962950-38963029,38963112-38963228,
           38963393-38963527,38963714-38963883,38963970-38964087
          Length = 301

 Score =  177 bits (431), Expect = 1e-44
 Identities = 97/222 (43%), Positives = 130/222 (58%)
 Frame = +2

Query: 224 QDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 403
           QDKNKYNTPKYR +   +NKD+T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAA
Sbjct: 40  QDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAA 96

Query: 404 YSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGAR 583
           Y TG                          +Y VEP D     FR  LDVGL RTTTG R
Sbjct: 97  YCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADE-RRPFRALLDVGLIRTTTGNR 155

Query: 584 VFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDXX 763
           VFGA+KGA+DGGL++PHS KRF G   + +K         +++     +YMRS+ +++  
Sbjct: 156 VFGALKGALDGGLDIPHSDKRFAGF-KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPE 214

Query: 764 ILSXDNSTKYINLGVPADAIEAIYKKXP*XPXVRIPPXXRKS 889
                + ++Y+  G+ AD +E++YKK      +R  P   KS
Sbjct: 215 KFQA-HFSEYLKKGIDADGMESLYKKV--HAAIRADPTMAKS 253



 Score = 31.5 bits (68), Expect = 0.94
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 111 GFVKVVKNKQYFKRYQVKF 167
           GFVK  K   YFKR+QVKF
Sbjct: 3   GFVKTQKTHAYFKRFQVKF 21


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,494,322
Number of Sequences: 37544
Number of extensions: 441969
Number of successful extensions: 943
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)