Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_I09
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 222 1e-57
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 222 2e-57
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 222 2e-57
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 222 2e-57
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 222 2e-57
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 220 6e-57
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 218 3e-56
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 4e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 72 3e-12
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 222 bits (543), Expect = 1e-57
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRCLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 222 bits (542), Expect = 2e-57
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 222 bits (542), Expect = 2e-57
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 222 bits (542), Expect = 2e-57
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 222 bits (542), Expect = 2e-57
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 220 bits (537), Expect = 6e-57
Identities = 108/207 (52%), Positives = 132/207 (63%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 216
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 217 DAYKKQFS-QYIKNSVTPDMMEEMYKK 242
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 218 bits (532), Expect = 3e-56
Identities = 109/207 (52%), Positives = 133/207 (64%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 401 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 580
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 581 RVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSLEQDDX 760
+VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L ++D
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYLMEEDE 223
Query: 761 XILSXDNSTKYINLGVPADAIEAIYKK 841
S +YI V D +E +YKK
Sbjct: 224 DAYKKQFS-QYIKNSVTPD-MEEMYKK 248
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 8 MGFVKVVKNKAYFKRYQVKF 27
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 29 RRREGKTDYYARKRL 43
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 260 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 439
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 440 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 619
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 620 LNVPH 634
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 4e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 221 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 400
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 401 A 403
A
Sbjct: 98 A 98
Score = 44.0 bits (99), Expect = 7e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKF 167
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
Score = 35.9 bits (79), Expect = 0.20
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 172 RRREGKTDYYARKRL 216
RRREGKTDYYARKRL
Sbjct: 22 RRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/92 (42%), Positives = 52/92 (56%)
Frame = +2
Query: 566 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGL*CRIQKVQC*STQGSHLWFACCLEYMRSL 745
TTTG +VFGA+KGAVDGGL++PHS KRFPG ++ H+ +YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNA-EVHRKHIMGQNVADYMRYL 59
Query: 746 EQDDXXILSXDNSTKYINLGVPADAIEAIYKK 841
++D S +YI V D +E +YKK
Sbjct: 60 MEEDEDAYKKQFS-QYIKNSVTPDMMEEMYKK 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,487,906
Number of Sequences: 237096
Number of extensions: 2562757
Number of successful extensions: 4072
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4055
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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