Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_H24
         (916 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z81088-7|CAB03129.2|  337|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AF024498-7|AAF39806.2|  279|Caenorhabditis elegans Serpentine re...    28   8.1  

>Z72511-4|CAA96660.1|  395|Caenorhabditis elegans Hypothetical
           protein F55A11.7 protein.
          Length = 395

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 17/65 (26%), Positives = 31/65 (47%)
 Frame = -2

Query: 480 FMFICLRYYCRYFCCIFVLAAKQYPCFSISLFGLTITSCL*YFFLKLYRSISLCSTTTLY 301
           F+  C RYY ++ C +F+ A      F +++FG+     L +     + +I L      +
Sbjct: 221 FVDFCRRYYIQHLCYVFLFA------FVLTMFGIAFHGSLIFHETVEFATIVLSVLAFFF 274

Query: 300 LILFV 286
            +LFV
Sbjct: 275 FVLFV 279


>Z81088-7|CAB03129.2|  337|Caenorhabditis elegans Hypothetical
           protein F53F1.7 protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
 Frame = -2

Query: 456 YCRYFCCIFVLAAKQ--YPCFSISLFGLTITSCL*YFFLKLYRSISLCSTTTLYLILFVF 283
           +CR     F L  ++  YP ++ ++  + ++  +   FL L R     +    Y   FV 
Sbjct: 119 FCRVCAVCFPLFYQKLSYPKYTYTMQAIQLSGAVASVFLLLPREYKYVNENGGYYSAFVN 178

Query: 282 L*FRTVD*SF-SLLEYVDCWASADDRIANSLTHTFKLFKKVPSGSTA 145
             FR    +F ++LE +   A   + +   +T+ FKL KKV S  T+
Sbjct: 179 NEFRKPFFNFVAVLEILFVLAIVVNNLVTYITYRFKLKKKVLSRRTS 225


>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -2

Query: 456 YCRYFCCIFVLAAKQYPCFSISLFGLTITSCL*YFFLKLYRSISLCSTTTLYLILFVFL* 277
           YC +   I    A   P F  +LFG+ IT  L    + +YR + +      Y+ L  F  
Sbjct: 101 YCGFLIAINRFCAMYIPMFYSTLFGVKITFIL-TTLIFVYRIVKIIMELIHYIPLQCFSS 159

Query: 276 FRTVD*SFS 250
           F + D S++
Sbjct: 160 FSSYDISWA 168


>AF024498-7|AAF39806.2|  279|Caenorhabditis elegans Serpentine
           receptor, class x protein104 protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
 Frame = -2

Query: 396 ISLFGLTITSCL*YFFLKLYRS--ISLCSTTTL--YLILFVFL 280
           +S  G+ I   + YFFLKL ++    LCS+ T+   +ILF +L
Sbjct: 18  VSFCGILINFYMFYFFLKLQKTSFYVLCSSKTISNSIILFAYL 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,912,934
Number of Sequences: 27780
Number of extensions: 293333
Number of successful extensions: 876
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)