Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_H22
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...   179   3e-45
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...   179   3e-45
AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical ...    36   0.051
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p...    29   5.8  
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp...    29   5.8  
AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical...    28   7.7  

>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score =  179 bits (435), Expect = 3e-45
 Identities = 77/103 (74%), Positives = 94/103 (91%)
 Frame = +3

Query: 123 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 302
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 2   ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 61

Query: 303 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQ 431
           LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ
Sbjct: 62  LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQ 104



 Score =  174 bits (424), Expect = 6e-44
 Identities = 83/127 (65%), Positives = 88/127 (69%)
 Frame = +1

Query: 421 LASKXTVDEALYQXXXXXXXXXXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRY 600
           L  + TVDEALYQ                       RLAACFLDSMATLG+ AYGYG+RY
Sbjct: 101 LGIQATVDEALYQLGLDIEELQEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRY 160

Query: 601 EYGIFAQKIENGEQQEEPDDWLRFGNPWEKARPEFMLPVNFYGSVVDTPDGKKWIDTQVV 780
           EYGIF Q I +G Q EEPDDWLRFGNPWEKARPE+MLPVNFYG VV      KWIDTQVV
Sbjct: 161 EYGIFKQLIRDGWQIEEPDDWLRFGNPWEKARPEYMLPVNFYGKVVKEDGKSKWIDTQVV 220

Query: 781 FAMPYDT 801
           FAMPYDT
Sbjct: 221 FAMPYDT 227



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +3

Query: 801 PIPGYNNNVVNTLRLWSAK 857
           P+PGY NN+VNTLRLWSAK
Sbjct: 228 PVPGYKNNIVNTLRLWSAK 246


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score =  179 bits (435), Expect = 3e-45
 Identities = 77/103 (74%), Positives = 94/103 (91%)
 Frame = +3

Query: 123 VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 302
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 38  ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 97

Query: 303 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQ 431
           LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ
Sbjct: 98  LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQ 140



 Score =  174 bits (424), Expect = 6e-44
 Identities = 83/127 (65%), Positives = 88/127 (69%)
 Frame = +1

Query: 421 LASKXTVDEALYQXXXXXXXXXXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRY 600
           L  + TVDEALYQ                       RLAACFLDSMATLG+ AYGYG+RY
Sbjct: 137 LGIQATVDEALYQLGLDIEELQEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRY 196

Query: 601 EYGIFAQKIENGEQQEEPDDWLRFGNPWEKARPEFMLPVNFYGSVVDTPDGKKWIDTQVV 780
           EYGIF Q I +G Q EEPDDWLRFGNPWEKARPE+MLPVNFYG VV      KWIDTQVV
Sbjct: 197 EYGIFKQLIRDGWQIEEPDDWLRFGNPWEKARPEYMLPVNFYGKVVKEDGKSKWIDTQVV 256

Query: 781 FAMPYDT 801
           FAMPYDT
Sbjct: 257 FAMPYDT 263



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = +3

Query: 801 PIPGYNNNVVNTLRLWSAK 857
           P+PGY NN+VNTLRLWSAK
Sbjct: 264 PVPGYKNNIVNTLRLWSAK 282


>AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical
           protein T04D1.2 protein.
          Length = 381

 Score = 35.5 bits (78), Expect = 0.051
 Identities = 22/82 (26%), Positives = 41/82 (50%)
 Frame = +3

Query: 138 EKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRW 317
           E  K  SVR +V +EN+++ ++ ++     T V  R + TP   Y+ +   +KD+   + 
Sbjct: 96  EHLKTYSVRQLVVIENISDYQEFYDMMWSQTTVSYRFLTTPPVTYW-IRSVIKDYPNMKL 154

Query: 318 IRTQQYYYENDPKRVYYLSLEY 383
                  YEN  +  +YL++ Y
Sbjct: 155 NGISYMSYENKKELEHYLNVLY 176


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
 Frame = +1

Query: 682 WEKARPEFMLPVNFYGSVVDTPDGKKWI---DTQVVFAMPYDTLFLVITIM 825
           ++KA   F+L    +GS+VD P   +WI   +  V F +P+  LFL I ++
Sbjct: 248 FKKAPSNFVLNCQPWGSIVDLPP-PRWIQILELVVQFGIPFFILFLYIAVI 297


>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
           protein K08F8.6 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 616 AQKIENGEQQEEPDDWLRFGNPWEKARPEFMLPVNFYGSVVDTPDGKKW 762
           A+KIE+   Q +P + +  G+P E    +    +  Y S++ TP G K+
Sbjct: 753 AEKIEHAHYQFDPSNQMT-GSPREYHLKDLPKKIQKYESILPTPKGNKF 800


>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
           protein K08F8.6 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 616 AQKIENGEQQEEPDDWLRFGNPWEKARPEFMLPVNFYGSVVDTPDGKKW 762
           A+KIE+   Q +P + +  G+P E    +    +  Y S++ TP G K+
Sbjct: 753 AEKIEHAHYQFDPSNQMT-GSPREYHLKDLPKKIQKYESILPTPKGNKF 800


>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
           subunit Med13 protein.
          Length = 2862

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 616 AQKIENGEQQEEPDDWLRFGNPWEKARPEFMLPVNFYGSVVDTPDGKKW 762
           A+KIE+   Q +P + +  G+P E    +    +  Y S++ TP G K+
Sbjct: 753 AEKIEHAHYQFDPSNQMT-GSPREYHLKDLPKKIQKYESILPTPKGNKF 800


>AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical
           protein Y102A5C.31 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +1

Query: 730 SVVDTPDGKKWIDTQVVFAMPYDTLFLVITI 822
           S++D PD   W++  +++A+ Y    LVI++
Sbjct: 179 SIIDDPDFHLWLEEPMLYAIHYGLTALVISL 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,896,329
Number of Sequences: 27780
Number of extensions: 438365
Number of successful extensions: 1137
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)