Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H20
(857 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062684-1|AAH62684.1| 121|Homo sapiens short coiled-coil prote... 105 3e-22
BC016511-1|AAH16511.2| 115|Homo sapiens Similar to short coiled... 105 3e-22
AK027797-1|BAB55375.1| 122|Homo sapiens protein ( Homo sapiens ... 105 3e-22
AF330205-1|AAK01707.1| 82|Homo sapiens short coiled-coil prote... 105 3e-22
AB015335-1|BAA88116.1| 125|Homo sapiens HRIHFB2072 protein. 105 3e-22
AF448857-1|AAP97732.1| 54|Homo sapiens short coiled coil prote... 80 1e-14
AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens ... 35 0.33
M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein. 33 1.3
BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 1.3
BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,... 33 1.3
AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein p... 33 1.3
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 33 1.8
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 33 1.8
BC001750-1|AAH01750.1| 458|Homo sapiens CEP72 protein protein. 32 2.3
BC000132-1|AAH00132.1| 647|Homo sapiens centrosomal protein 72k... 32 2.3
AK002071-1|BAA92068.1| 528|Homo sapiens protein ( Homo sapiens ... 32 2.3
AK001427-1|BAA91685.1| 458|Homo sapiens protein ( Homo sapiens ... 32 2.3
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 31 4.1
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 31 4.1
AB014589-1|BAA31664.1| 547|Homo sapiens KIAA0689 protein protein. 31 4.1
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 31 5.4
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 31 5.4
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 31 5.4
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 31 5.4
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 31 5.4
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 31 5.4
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 31 5.4
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 31 5.4
X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA) prot... 31 7.1
M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein. 31 7.1
M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein. 31 7.1
M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein. 31 7.1
M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyos... 31 7.1
M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblas... 31 7.1
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 31 7.1
BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 7.1
AL158199-3|CAI20490.1| 612|Homo sapiens chromosome 6 open readi... 31 7.1
AL138916-4|CAI14698.1| 612|Homo sapiens chromosome 6 open readi... 31 7.1
AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 7.1
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 31 7.1
AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta) is... 31 7.1
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 31 7.1
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 31 7.1
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 31 7.1
AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 27 7.9
AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein. 30 9.4
AL158199-2|CAI20489.1| 612|Homo sapiens chromosome 6 open readi... 30 9.4
AL138916-3|CAI14697.1| 612|Homo sapiens chromosome 6 open readi... 30 9.4
AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein varian... 30 9.4
AB040952-1|BAA96043.1| 648|Homo sapiens KIAA1519 protein protein. 30 9.4
AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein. 30 9.4
>BC062684-1|AAH62684.1| 121|Homo sapiens short coiled-coil protein
protein.
Length = 121
Score = 105 bits (251), Expect = 3e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 170 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 349
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 55 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 114
Query: 350 TPNIQKK 370
++K
Sbjct: 115 DTKSKRK 121
>BC016511-1|AAH16511.2| 115|Homo sapiens Similar to short
coiled-coil protein protein.
Length = 115
Score = 105 bits (251), Expect = 3e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 170 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 349
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 49 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 108
Query: 350 TPNIQKK 370
++K
Sbjct: 109 DTKSKRK 115
>AK027797-1|BAB55375.1| 122|Homo sapiens protein ( Homo sapiens
cDNA FLJ14891 fis, clone PLACE1004256, weakly similar to
Mus musculus short coiled coil protein SCOCO (Scoc)
mRNA. ).
Length = 122
Score = 105 bits (251), Expect = 3e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 170 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 349
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 56 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 115
Query: 350 TPNIQKK 370
++K
Sbjct: 116 DTKSKRK 122
>AF330205-1|AAK01707.1| 82|Homo sapiens short coiled-coil protein
SCOCO protein.
Length = 82
Score = 105 bits (251), Expect = 3e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 170 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 349
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 16 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 75
Query: 350 TPNIQKK 370
++K
Sbjct: 76 DTKSKRK 82
>AB015335-1|BAA88116.1| 125|Homo sapiens HRIHFB2072 protein.
Length = 125
Score = 105 bits (251), Expect = 3e-22
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +2
Query: 170 EQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQST 349
E EEK RLI+QVLELQ+TL+DLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T
Sbjct: 59 ELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTT 118
Query: 350 TPNIQKK 370
++K
Sbjct: 119 DTKSKRK 125
>AF448857-1|AAP97732.1| 54|Homo sapiens short coiled coil protein
protein.
Length = 54
Score = 79.8 bits (188), Expect = 1e-14
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +2
Query: 224 LDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQSTTPNIQKK 370
+DDLS RVD+VKEENLKL+SENQVLGQYIENLMSASSVFQ+T ++K
Sbjct: 6 MDDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK 54
>AK055217-1|BAB70876.1| 688|Homo sapiens protein ( Homo sapiens
cDNA FLJ30655 fis, clone DFNES2000268, weakly similar to
MYOSIN HEAVY CHAIN, STRIATED MUSCLE. ).
Length = 688
Score = 35.1 bits (77), Expect = 0.33
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 167 DEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
D EE +R + +LQN L+ + V E+ LKL+ EN+ L + E+L
Sbjct: 480 DSSEEISRYQEMIQKLQNVLESERENCGLVSEQRLKLQQENKQLRKETESL 530
>M69181-1|AAA99177.1| 1976|Homo sapiens non-muscle myosin B protein.
Length = 1976
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 170 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 322
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 323 SASSVFQSTTPNIQKK 370
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>BC117691-1|AAI17692.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 170 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 322
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 323 SASSVFQSTTPNIQKK 370
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>BC117690-1|AAI17691.1| 1976|Homo sapiens myosin, heavy chain 10,
non-muscle protein.
Length = 1976
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 170 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 322
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1353 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1412
Query: 323 SASSVFQSTTPNIQKK 370
A + T +Q++
Sbjct: 1413 LAYDKLEKTKNRLQQE 1428
>AB210026-1|BAE06108.1| 2018|Homo sapiens MYH10 variant protein
protein.
Length = 2018
Score = 33.1 bits (72), Expect = 1.3
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Frame = +2
Query: 170 EQEEKAR--LISQVLELQNTLDDLSQRVD-------SVKEENLKLRSENQVLGQYIENLM 322
E+EE+AR L QVL LQ+ L D ++VD S++E KL + + L Q +E
Sbjct: 1395 EEEEEARKNLEKQVLALQSQLADTKKKVDDDLGTIESLEEAKKKLLKDAEALSQRLEEKA 1454
Query: 323 SASSVFQSTTPNIQKK 370
A + T +Q++
Sbjct: 1455 LAYDKLEKTKNRLQQE 1470
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 152 PDSGIDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLK-LRSENQVLGQYIENLMSA 328
PD G Q+E RL SQ+LEL+ + + +E K + + NQ++ ++ +N +
Sbjct: 676 PDIGQCHQDELERLKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNN 735
Query: 329 SSVF 340
SS F
Sbjct: 736 SSAF 739
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372
protein.
Length = 3225
Score = 32.7 bits (71), Expect = 1.8
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 152 PDSGIDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLK-LRSENQVLGQYIENLMSA 328
PD G Q+E RL SQ+LEL+ + + +E K + + NQ++ ++ +N +
Sbjct: 642 PDIGQCHQDELERLKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNN 701
Query: 329 SSVF 340
SS F
Sbjct: 702 SSAF 705
>BC001750-1|AAH01750.1| 458|Homo sapiens CEP72 protein protein.
Length = 458
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 167 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 283
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 301 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 343
>BC000132-1|AAH00132.1| 647|Homo sapiens centrosomal protein 72kDa
protein.
Length = 647
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 167 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 283
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 490 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 532
>AK002071-1|BAA92068.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ11209 fis, clone PLACE1007946. ).
Length = 528
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +2
Query: 173 QEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQSTT 352
+EE+ R Q TLD++ +++ N KLR EN LG+ ++ L+ ++ +
Sbjct: 231 REEEERRKEATAHFQITLDEIQAQLEQHDIHNAKLRQENIELGEKLKKLIEQYALREEHI 290
Query: 353 PNIQKK 370
+ K+
Sbjct: 291 DKVFKR 296
>AK001427-1|BAA91685.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ10565 fis, clone NT2RP2002954. ).
Length = 458
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Frame = +2
Query: 167 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 283
++Q++ AR +S+V EL +T LDDL Q +D EEN +L+S
Sbjct: 301 EQQQQHAREMSEVTAELHHTHKELDDLRQHLDKSLEENSRLKS 343
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 110 GSSSPGLNGPASFEPDSG--IDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRS 283
G+S G + P+SF P + +EKA LI QVL+L T D ++ ++ L L+
Sbjct: 550 GASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQL--TADQIAMLPPEQRQSILILKE 607
Query: 284 ENQ 292
+ Q
Sbjct: 608 QIQ 610
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 110 GSSSPGLNGPASFEPDSG--IDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRS 283
G+S G + P+SF P + +EKA LI QVL+L T D ++ ++ L L+
Sbjct: 550 GASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQL--TADQIAMLPPEQRQSILILKE 607
Query: 284 ENQ 292
+ Q
Sbjct: 608 QIQ 610
>AB014589-1|BAA31664.1| 547|Homo sapiens KIAA0689 protein protein.
Length = 547
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 110 GSSSPGLNGPASFEPDSG--IDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRS 283
G+S G + P+SF P + +EKA LI QVL+L T D ++ ++ L L+
Sbjct: 481 GASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQL--TADQIAMLPPEQRQSILILKE 538
Query: 284 ENQ 292
+ Q
Sbjct: 539 QIQ 541
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 79 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 128
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 31.1 bits (67), Expect = 5.4
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 110 GSSSPGLNGPASFEPDSG--IDEQEEKARLISQVLELQNTLDDLSQRVDSVKEENLKLRS 283
G+S G + P+SF P + +EKA LI QVL+L T D ++ ++ L L+
Sbjct: 550 GASRQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQL--TADQIAMLPPEQRQSILILKE 607
Query: 284 ENQ 292
+ Q
Sbjct: 608 QIQ 610
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 196 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 245
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ T+DDL +++ KEEN+ L +Q L Q + L
Sbjct: 232 LKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGL---HQTLDQTLNEL 281
>X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA)
protein.
Length = 227
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 175 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 224
>M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein.
Length = 229
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 177 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 226
>M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyosin
mRNA, complete cds. ).
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 232 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 281
>M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblast
muscle-type tropomyosin mRNA, complete cds. ).
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 170 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 346
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 861 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 920
Query: 347 TTPNIQKK 370
+K+
Sbjct: 921 LLLEYEKQ 928
>BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AL158199-3|CAI20490.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +2
Query: 170 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 325
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLETLAAQEAAMK 591
Query: 326 ASSVFQSTTPNIQKK 370
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL138916-4|CAI14698.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.7 bits (66), Expect = 7.1
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +2
Query: 170 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 325
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLETLAAQEAAMK 591
Query: 326 ASSVFQSTTPNIQKK 370
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta)
isoform 2 variant protein.
Length = 284
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKL 277
+ E E +A + V +L+ T+DDL + + S KEEN+++
Sbjct: 232 LKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEI 270
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +2
Query: 164 IDEQEEKARLISQ-VLELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENL 319
+ E E +A + V +L+ ++DDL ++V KEENL S +Q+L Q + L
Sbjct: 274 LKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENL---SMHQMLDQTLLEL 323
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 170 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 346
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 861 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 920
Query: 347 TTPNIQKK 370
+K+
Sbjct: 921 LLLEYEKQ 928
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 30.7 bits (66), Expect = 7.1
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 170 EQEEKARLISQV-LELQNTLDDLSQRVDSVKEENLKLRSENQVLGQYIENLMSASSVFQS 346
E+EEK I V ++ + LD + +VKEE LRSE L + +L+ + +++
Sbjct: 913 EKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKN 972
Query: 347 TTPNIQKK 370
+K+
Sbjct: 973 LLLEYEKQ 980
>AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45488 fis, clone BRTHA2003759. ).
Length = 130
Score = 27.1 bits (57), Expect(2) = 7.9
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 668 VFFYIFLPFYNCVELVYLKCKMFLCFYCCNDLYYYVLIIQPGLFFIY 808
V+ YI+L Y + Y+ +F+ Y C +Y Y+ + +IY
Sbjct: 29 VYVYIYLYIYFYI-FTYIYLYIFIYIYICLYIYLYIYLYIFTYIYIY 74
Score = 22.2 bits (45), Expect(2) = 7.9
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 482 YKYIFGYLCIIYYIF*SKKCLIYNYL 559
Y Y+F Y+ I YIF +Y Y+
Sbjct: 8 YIYMFMYIFIFIYIFIYIYIYVYVYI 33
>AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.
Length = 1117
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 149 EPDSGIDEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 298
E S DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 217 EDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 267
>AL158199-2|CAI20489.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.3 bits (65), Expect = 9.4
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +2
Query: 170 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 325
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLEALSAQEAAMK 591
Query: 326 ASSVFQSTTPNIQKK 370
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AL138916-3|CAI14697.1| 612|Homo sapiens chromosome 6 open reading
frame 103 protein.
Length = 612
Score = 30.3 bits (65), Expect = 9.4
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Frame = +2
Query: 170 EQEEKARLISQVL----ELQNTLDDLSQRVDSVKEE--NLKLRSENQVLGQYI--ENLMS 325
+QEE+ +L +VL E+Q++LD+ Q++ ++EE N L +E+ L E M
Sbjct: 532 DQEERLKLKDEVLDMYKEMQDSLDEARQKIFDIREEYRNKLLEAEHLKLEALSAQEAAMK 591
Query: 326 ASSVFQSTTPNIQKK 370
+ + P+ QKK
Sbjct: 592 LETEKMTPAPDTQKK 606
>AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein variant
protein.
Length = 939
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 149 EPDSGIDEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 298
E S DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 245 EDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 295
>AB040952-1|BAA96043.1| 648|Homo sapiens KIAA1519 protein protein.
Length = 648
Score = 30.3 bits (65), Expect = 9.4
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Frame = +2
Query: 167 DEQEEKARLISQVL-ELQNT---LDDLSQRVDSVKEENLKLRS 283
++Q++ AR +S+V EL + LDDL Q +D EEN +L+S
Sbjct: 491 EQQQQHAREMSEVTAELHHAHKELDDLRQHLDKSLEENSRLKS 533
>AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein.
Length = 885
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 149 EPDSGIDEQEEKARLIS-QVLELQNTLDDLSQRVDSVKEENLKLRSENQVL 298
E S DE+ EK +++ Q ++++TL L ++ +++EE +L++EN++L
Sbjct: 61 EDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIREELNQLKNENRML 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,650,392
Number of Sequences: 237096
Number of extensions: 2206222
Number of successful extensions: 5661
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5640
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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