Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H18
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 41 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 41 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 41 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.007
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.007
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.030
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 36 0.030
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 36 0.030
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 36 0.030
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.48
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.48
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 30 2.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 30 2.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 3.4
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.4
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.4
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 29 3.4
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 29 3.4
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 3.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 3.4
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 4.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.0
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.0
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 6.0
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/81 (35%), Positives = 29/81 (35%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGP 612
PPPP P P PP P GG PPP GG P GG P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPP---PPPP 765
Query: 613 XXGPXPXXXPVXGXFPKXPPP 675
P P P G F PPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 37.1 bits (82), Expect = 0.017
Identities = 29/102 (28%), Positives = 31/102 (30%)
Frame = +2
Query: 398 GGGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXG 577
GG PPPP G P PP PP GG PPP P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 756
Query: 578 XXPXKXFFXKGPXXXXXPKXXXXGGFSXRXPPPXKXXKKSPL 703
P G P GGF PPP +P+
Sbjct: 757 GPPPPPPPPGG--CPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXK------PXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPPPG G P PP P PP GG PPP F P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
P GG PPP PGG G P P GG PPPPP
Sbjct: 721 PITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/81 (35%), Positives = 29/81 (35%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGP 612
PPPP P P PP P GG PPP GG P GG P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPP---PPPP 765
Query: 613 XXGPXPXXXPVXGXFPKXPPP 675
P P P G F PPP
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPP 786
Score = 37.1 bits (82), Expect = 0.017
Identities = 29/102 (28%), Positives = 31/102 (30%)
Frame = +2
Query: 398 GGGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXG 577
GG PPPP G P PP PP GG PPP P G
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 756
Query: 578 XXPXKXFFXKGPXXXXXPKXXXXGGFSXRXPPPXKXXKKSPL 703
P G P GGF PPP +P+
Sbjct: 757 GPPPPPPPPGG--CPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXK------PXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPPPG G P PP P PP GG PPP F P P
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
P GG PPP PGG G P P GG PPPPP
Sbjct: 721 PITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.1 bits (92), Expect = 0.001
Identities = 29/81 (35%), Positives = 29/81 (35%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGP 612
PPPP P P PP P GG PPP GG P GG P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPP---ITGGPPPPPPPGG--LPPISGGPPPP---PPPP 348
Query: 613 XXGPXPXXXPVXGXFPKXPPP 675
P P P G F PPP
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPP 369
Score = 37.1 bits (82), Expect = 0.017
Identities = 29/102 (28%), Positives = 31/102 (30%)
Frame = +2
Query: 398 GGGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXG 577
GG PPPP G P PP PP GG PPP P G
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 339
Query: 578 XXPXKXFFXKGPXXXXXPKXXXXGGFSXRXPPPXKXXKKSPL 703
P G P GGF PPP +P+
Sbjct: 340 GPPPPPPPPGG--CPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/57 (35%), Positives = 20/57 (35%), Gaps = 6/57 (10%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXK------PXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPPPG G P PP P PP GG PPP F P P
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 28.3 bits (60), Expect = 7.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
P GG PPP PGG G P P GG PPPPP
Sbjct: 304 PITGGPP--PPPPPGGLPPITGGPPPPPPPGGLPPISGG----PPPPPPPP 348
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/85 (34%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXP-PXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKK---XF 600
PPPP G W P P P P +TP P G PPP P GG P
Sbjct: 287 PPPPPSSGM--WPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMPPPPPPGMR 342
Query: 601 XKGPXXGPXPXXXPVXGXFPKXPPP 675
G P P P G PPP
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPP 544
PPPP G P PP +P P G G PPP
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXF-XKG 609
PPPP P P P TP P +PPP P G P
Sbjct: 265 PPPPSVTPMP--PPMPPTPGMTPRPPPPPSSGMWPPP-----PPPPPGRTPGPPGMPGMP 317
Query: 610 PXXGPXPXXXPVXGXFPKXPPP 675
P P P G P PPP
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPG---GXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
P G PPP PG G G P + PG GG+ PPPPP
Sbjct: 291 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM-----PPPPPP 339
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 537 GKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
G PPP P G + GG P + G G++ PPPPP
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPR--YPSAGPGMY-----PPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/85 (34%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXP-PXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKK---XF 600
PPPP G W P P P P +TP P G PPP P GG P
Sbjct: 297 PPPPPSSGM--WPPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMPPPPPPGMR 352
Query: 601 XKGPXXGPXPXXXPVXGXFPKXPPP 675
G P P P G PPP
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPP 544
PPPP G P PP +P P G G PPP
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/82 (29%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXF-XKG 609
PPPP P P P TP P +PPP P G P
Sbjct: 275 PPPPSVTPMP--PPMPPTPGMTPRPPPPPSSGMWPPP-----PPPPPGRTPGPPGMPGMP 327
Query: 610 PXXGPXPXXXPVXGXFPKXPPP 675
P P P G P PPP
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/54 (35%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPG---GXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
P G PPP PG G G P + PG GG+ PPPPP
Sbjct: 301 PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM-----PPPPPP 349
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 537 GKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
G PPP P G + GG P + G G++ PPPPP
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPR--YPSAGPGMY-----PPPPP 378
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 472 PXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGPXXGPXPXXXPVXG 651
P P PP K P G G PPP G P+ G P P P G
Sbjct: 237 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 652 XFPKXPPP 675
P PPP
Sbjct: 296 SPPPPPPP 303
Score = 36.3 bits (80), Expect = 0.030
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKG 609
+PPPP G PP +T P G PPP GG P+ G P
Sbjct: 254 SPPPPPAAG-------SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 610 PXXGPXPXXXPVXGXFPK-----XPPPXKXXKK 693
P G P P G P PPP K+
Sbjct: 307 PPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKR 337
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPP G P PP PP G PPP G P G P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPP 290
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGG---GXXFPPPXGGXXXXPKXGG-XPXKKX 597
+PPPP G P P P P G G PP GG G P +
Sbjct: 279 SPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 335
Query: 598 FXKGPXXGPXPXXXPVXGXFPKXPPP 675
+ P P P P G P PP
Sbjct: 336 KRQAPERSP-PTGSPPTGSPPTGRPP 360
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 472 PXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGPXXGPXPXXXPVXG 651
P P PP K P G G PPP G P+ G P P P G
Sbjct: 258 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 652 XFPKXPPP 675
P PPP
Sbjct: 317 SPPPPPPP 324
Score = 36.3 bits (80), Expect = 0.030
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKG 609
+PPPP G PP +T P G PPP GG P+ G P
Sbjct: 275 SPPPPPAAG-------SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 610 PXXGPXPXXXPVXGXFPK-----XPPPXKXXKK 693
P G P P G P PPP K+
Sbjct: 328 PPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKR 358
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPP G P PP PP G PPP G P G P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPP 311
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGG---GXXFPPPXGGXXXXPKXGG-XPXKKX 597
+PPPP G P P P P G G PP GG G P +
Sbjct: 300 SPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 356
Query: 598 FXKGPXXGPXPXXXPVXGXFPKXPPP 675
+ P P P P G P PP
Sbjct: 357 KRQAPERSP-PTGSPPTGSPPTGRPP 381
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 472 PXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGPXXGPXPXXXPVXG 651
P P PP K P G G PPP G P+ G P P P G
Sbjct: 243 PPPPPPPKGSPPLA-GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 652 XFPKXPPP 675
P PPP
Sbjct: 302 SPPPPPPP 309
Score = 36.3 bits (80), Expect = 0.030
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKG 609
+PPPP G PP +T P G PPP GG P+ G P
Sbjct: 260 SPPPPPAAG-------SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 610 PXXGPXPXXXPVXGXFPK-----XPPPXKXXKK 693
P G P P G P PPP K+
Sbjct: 313 PPTGSLP--PPQAGGSPPPAGTGSPPPPPRQKR 343
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXGXXP 586
PPP G P PP PP G PPP G P G P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPPPAGGSPP 296
Score = 28.7 bits (61), Expect = 6.0
Identities = 25/86 (29%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Frame = +1
Query: 430 NPPPPXXXGFFFWXPXPXPPXKTPXPXXXGG---GXXFPPPXGGXXXXPKXGG-XPXKKX 597
+PPPP G P P P P G G PP GG G P +
Sbjct: 285 SPPPPPAGGS---PPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQ 341
Query: 598 FXKGPXXGPXPXXXPVXGXFPKXPPP 675
+ P P P P G P PP
Sbjct: 342 KRQAPERSP-PTGSPPTGSPPTGRPP 366
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.017
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 431 TPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPP 544
TP P G F+ P PP P PPG GG PP
Sbjct: 221 TPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGPP 258
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 36.3 bits (80), Expect = 0.030
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +1
Query: 436 PPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPP-XGGXXXXPKXGGXPXKKXFXKGP 612
PPP GF P P P P P GG PPP GG P G P G
Sbjct: 66 PPPVPNGFI--PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL 123
Query: 613 XXGPXP 630
P P
Sbjct: 124 GVAPQP 129
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +1
Query: 463 FWXPXPXPPXKTPXPXXXGGGXXFPPPXGG--XXXXPKXGGXPXKKXFXKGPXXGPXPXX 636
F+ P P P P P GG PP G P GG P P P P
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Query: 637 XPVXGXFPKXPPP 675
G P+ P P
Sbjct: 123 ---LGVAPQPPRP 132
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/94 (30%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFP-PPXGGXXXXPKX 573
GGGGG NP PP G P P P G G P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 574 GGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
GG P GP P P P P P P
Sbjct: 152 GGPPGPAG-PAGPPGPPGPDGNPGSPAGPSGPGP 184
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/94 (30%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFP-PPXGGXXXXPKX 573
GGGGG NP PP G P P P G G P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 574 GGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
GG P GP P P P P P P
Sbjct: 152 GGPPGPAG-PAGPPGPPGPDGNPGSPAGPSGPGP 184
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/94 (30%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFP-PPXGGXXXXPKX 573
GGGGG NP PP G P P P G G P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 574 GGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
GG P GP P P P P P P
Sbjct: 152 GGPPGPAG-PAGPPGPPGPDGNPGSPAGPSGPGP 184
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.030
Identities = 29/94 (30%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFP-PPXGGXXXXPKX 573
GGGGG NP PP G P P P G G P P P
Sbjct: 92 GGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP 151
Query: 574 GGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
GG P GP P P P P P P
Sbjct: 152 GGPPGPAG-PAGPPGPPGPDGNPGSPAGPSGPGP 184
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 35.9 bits (79), Expect = 0.039
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTP---XPXXXGGGXXFPPPXGG 552
GGGGG PPPP G P P + P P GGG P P GG
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = +1
Query: 436 PPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGPX 615
PPP + P P P P GG PP GG P G P G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG--APGGG 805
Query: 616 XGPXPXXXPVXGXFPKXPPP 675
G P P P PPP
Sbjct: 806 GGMYPPLIPTRPG-PGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/80 (30%), Positives = 25/80 (31%)
Frame = +1
Query: 436 PPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGPX 615
PPP + P P P P GG PP GG P G P G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG--APGGG 805
Query: 616 XGPXPXXXPVXGXFPKXPPP 675
G P P P PPP
Sbjct: 806 GGMYPPLIPTRPG-PGGPPP 824
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
GGG GG G GG G GGGG PPPPP
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +2
Query: 401 GGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGG 523
GGGG+ PPPP P PP P P GGG
Sbjct: 291 GGGGYSAPAAAPPPP---------PPPPPPPAPAPVSSGGG 322
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +1
Query: 403 GGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGG 579
GGG + PPP P P PP P P GGG GG GG
Sbjct: 291 GGGGYSAPAAAPPP---------PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
GGG PPP P G G GG G GGGG PPP P
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCG--------GGGGC-----APPPAP 78
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGG 436
GGG PPP P G G GG G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 507 GGXGFXGGXGXXXPKKKXXX--PGGGGVFXXXKXPPPPP 397
GG G+ GG G GGGG PPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +2
Query: 401 GGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGG 523
GGGG+ PPPP P PP P P GGG
Sbjct: 291 GGGGYSAPAAAPPPP---------PPPPPPPAPAPVSSGGG 322
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +1
Query: 403 GGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGG 579
GGG + PPP P P PP P P GGG GG GG
Sbjct: 291 GGGGYSAPAAAPPP---------PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGGG 340
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/49 (40%), Positives = 20/49 (40%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
GGG PPP P G G GG G GGGG PPP P
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCG--------GGGGC-----APPPAP 78
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGG 436
GGG PPP P G G GG G GGG
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGG 102
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 507 GGXGFXGGXGXXXPKKKXXX--PGGGGVFXXXKXPPPPP 397
GG G+ GG G GGGG PPPPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 472 PXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXG 576
P P PP P P GG PPP G P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGG 520
PPPP G P PP P P G GG
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGG 520
PPPP G P PP P P G GG
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = +1
Query: 379 FFXPXXGGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPP 543
F P GGGG PP P G P P + P GGG PPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLS-LPSLGGGGGCCPPP 70
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPK-KKXXXP--GGGGVFXXXKXPPPPP 397
GG PPP P G GG G P+ P GGGG PPP P
Sbjct: 25 GGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGG----GCCPPPAP 72
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGG 439
P G G PP PGG G G G P K P G
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGG 439
P G G PP PGG G G G P K P G
Sbjct: 618 PGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRG 654
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 472 PXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXG 576
P P PP P P GG PPP G P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTP--XPXXXGGGXXFPPPXGGXXXXPK 570
GGGGG PPPP G P P + P GGG P P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAP 81
Query: 571 XGG 579
GG
Sbjct: 82 AGG 84
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Frame = +1
Query: 397 GGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTP--XPXXXGGGXXFPPPXGGXXXXPK 570
GGGGG PPPP G P P + P GGG P P
Sbjct: 22 GGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAP 81
Query: 571 XGG 579
GG
Sbjct: 82 AGG 84
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/63 (33%), Positives = 23/63 (36%)
Frame = +2
Query: 398 GGGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXGXXXFXPKXG 577
GG GG+ PPPPG P P PP G G PPP G + P
Sbjct: 404 GGPGGYG-----PPPPGG---------PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT 449
Query: 578 XXP 586
P
Sbjct: 450 GFP 452
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +2
Query: 398 GGGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFP 538
GG GGF PPPPG + PP PPG G P
Sbjct: 428 GGPGGFG-----PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/84 (30%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = +1
Query: 433 PPPPXXX--GFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXG-GXPXKKXFX 603
PPPP G F P PP P G P GG P G G P
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
Query: 604 KGPXXGPXPXXXPVXGXFPKXPPP 675
+G G P P G PPP
Sbjct: 427 QGGPGGFGP--PPPGGPGAYGPPP 448
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGG 433
P GG PP PGG G G P PG G
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXF 600
PPPP P P PP P GG PPP GG KK +
Sbjct: 564 PPPPLPQNLSGAPPPPPPP-----PPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPPXG 550
PPPP G P P P PP GG PPP G
Sbjct: 563 PPPPPLPQNLSGAPPPPP---PPPPMLGGPPPPPPPPGG 598
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/81 (27%), Positives = 22/81 (27%)
Frame = +1
Query: 433 PPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXPXKKXFXKGP 612
PPPP G PP P G PPP GG P
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP--PPVGMANGGPPPPPPLPLDL 561
Query: 613 XXGPXPXXXPVXGXFPKXPPP 675
G V G P PPP
Sbjct: 562 LKGAVAGLKSVPGGPPPPPPP 582
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGG 433
GGG PP PG G G G P + PG G
Sbjct: 274 GGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDG 310
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Frame = +2
Query: 440 PPGXXXFFFGXXXPXPPXKPXP---PGXGGGXXXFPPP 544
PPG P P +P P PG GGG PPP
Sbjct: 286 PPGDPGIDGAPGNPGSPGEPGPPGQPGAGGGCDHCPPP 323
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 436 PPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXP 585
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGG 433
P GG PP PGG G G G P+ PG GG
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGPAGRGGPR---GPPGPGG 186
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 434 PPPPGXXXFFFGXXXPXPPXKPXPPGXGGGXXXFPPP 544
P PPG P P P PPG G PPP
Sbjct: 113 PGPPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPP 149
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -3
Query: 585 GXXPXFGXXXXXPXGGGKXXXPPPX---PGGXGFXGGXGXXXPK 463
G P G P GG PPP PGG G GG G PK
Sbjct: 181 GGPPGHGGQGGPPGHGGMGG-PPPGQGGPGGPGGPGGPGGMLPK 223
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -3
Query: 585 GXXPXFGXXXXXPXGGGKXXXPPPX---PGGXGFXGGXGXXXPK 463
G P G P GG PPP PGG G GG G PK
Sbjct: 461 GGPPGHGGQGGPPGHGGMGG-PPPGQGGPGGPGGPGGPGGMLPK 503
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -3
Query: 522 PPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
PP GG G GG G P+ PG G P PP
Sbjct: 264 PPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEPRTPP 305
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -3
Query: 522 PPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPPP 397
PP GG G GG G P+ PG G P PP
Sbjct: 264 PPGDAGGPGPVGGQGPPGPQGPQGPPGDEGSCDHCPEPRTPP 305
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 549 PXGGGKXXXPPPXPGGXGFXGGXGXXXPKKKXXXPGGGG 433
P G P PGG GF G G P PG G
Sbjct: 211 PQGPPGSSGAPGAPGGPGFPGAPGSKGPSGAPGQPGANG 249
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 436 PPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFPPPXGGXXXXPKXGGXP 585
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = -3
Query: 543 GGGKXXXPPPXPGGXGF-XGGXGXXXPKKKXXXPGGG 436
GGG PPP P G GG G P P GG
Sbjct: 24 GGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAPAGG 60
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 401 GGGGFXXXXKTPPPPGXXXFFFGXXXPXPPXKPXPPGXGG 520
GG G P PPG G P PP P PPG G
Sbjct: 249 GGPGPAGPPGPPGPPGQDGSG-GAAQPGPPGPPGPPGNDG 287
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/96 (29%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Frame = +1
Query: 400 GGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXKTPXPXXXGGGXXFP-PPXGGXXXXPKXG 576
GGGG NP PP G P P P G G P P P
Sbjct: 108 GGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPA 167
Query: 577 GXPXK--KXFXKGPXXGPXPXXXPV--XGXFPKXPP 672
G P G GP P P G P PP
Sbjct: 168 GPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPP 203
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 522 PPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPP 400
PP PG G G G PK G GV P PP
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPP 273
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/99 (28%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Frame = +1
Query: 388 PXXGGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXK-TPXPXXXGGGXXFPPPXG--GXX 558
P GG G F PP G F P PP P P G P G
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPF--NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPS 263
Query: 559 XXPKXGGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
P GG P P G P G P PP
Sbjct: 264 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPP 302
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/99 (28%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Frame = +1
Query: 388 PXXGGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXK-TPXPXXXGGGXXFPPPXG--GXX 558
P GG G F PP G F P PP P P G P G
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPF--DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPS 278
Query: 559 XXPKXGGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
P GG P P G P G P PP
Sbjct: 279 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPP 317
Score = 28.7 bits (61), Expect = 6.0
Identities = 28/99 (28%), Positives = 28/99 (28%), Gaps = 3/99 (3%)
Frame = +1
Query: 388 PXXGGGGGXFXXXKNPPPPXXXGFFFWXPXPXPPXK-TPXPXXXGGGXXFPPPXG--GXX 558
P GG G F PP G F P PP P P G P G
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPF--NPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPS 458
Query: 559 XXPKXGGXPXKKXFXKGPXXGPXPXXXPVXGXFPKXPPP 675
P GG P P G P G P PP
Sbjct: 459 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPP 497
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 522 PPPXPGGXGFXGGXGXXXPKKKXXXPGGGGVFXXXKXPPPP 400
PP PG G G G PK G GV P PP
Sbjct: 233 PPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPP 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,942,385
Number of Sequences: 27780
Number of extensions: 228374
Number of successful extensions: 2075
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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