Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H14
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 155 4e-38
AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical... 30 1.9
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 30 2.4
U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 4.3
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 4.3
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 28 9.9
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 28 9.9
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 28 9.9
AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane cal... 28 9.9
AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane cal... 28 9.9
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 155 bits (376), Expect = 4e-38
Identities = 92/208 (44%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Frame = +2
Query: 248 KLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEILKS 427
+LL EGKTKQ+FD+ + Y L+ +KD +TA + V+ ++LEGK+ I+++T + VFE L+
Sbjct: 15 ELLAEGKTKQIFDIKGEKDYVLIRSKDSLTAFNAVRKNELEGKSRIASKTTSNVFEYLQL 74
Query: 428 AGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFXVHSSKTRDVL 607
G+ T F K SET F+++KC MIPIEWV RR+ATGSFLKRNPGV EGF + K
Sbjct: 75 LGLPTHFEKSISETEFVARKCTMIPIEWVARRVATGSFLKRNPGVKEGFRFNDLKLETFF 134
Query: 608 *G*RK--PRSPMVRGANHFSQIQL*RXXXXXXXXXXXXXXLRF*YL-KSWRKLGLCVTAH 778
P+ + ++ I + L F L K W L +A
Sbjct: 135 KDDANDDPQWTDEQIVSNGLMIDHLKIGREEISLMKKMTKLVFRALEKGW---ALSNSA- 190
Query: 779 XIDMKIEFGVXTEGXIVLADVIDSDSWK 862
IDMKIEFGV EG I+LADVID+DSW+
Sbjct: 191 LIDMKIEFGVTVEGEILLADVIDNDSWR 218
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 579 FTPPKQETFFKDDANHDPQWSEEQIIS 659
F K ETFFKDDAN DPQW++EQI+S
Sbjct: 125 FNDLKLETFFKDDANDDPQWTDEQIVS 151
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 688 IGRDEVDYMRKATILIFEILEKAWALRDCA 777
IGR+E+ M+K T L+F LEK WAL + A
Sbjct: 161 IGREEISLMKKMTKLVFRALEKGWALSNSA 190
>AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical
protein Y47D7A.16 protein.
Length = 417
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 408 TFAFV*LEIAAFPSKSWALTPSPAVILSLLRSKQYPGWS 292
TF F +A F S SW T S + LSLL +K GW+
Sbjct: 3 TFLFTFCLVAIFGSSSWIGTNSVWMELSLLTAKLPEGWN 41
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Frame = +3
Query: 72 GTTLTVAPLLVIYNL*KALIATYIRRAIPTVLEARFIPTCARKLQK-------CLILNKL 230
GT +T+ +L YNL +A + PTV F+ T +K + KL
Sbjct: 61 GTYITLDQILSPYNLTMWYMAVKLMDT-PTVGSEHFVETSREYAKKKNNSERFSFAVEKL 119
Query: 231 DNINWANFSLRVRPNRYSMFRTNLGTACFLT 323
+NIN N + R+S F NL + T
Sbjct: 120 ENINLTNKFKKFFEKRFSKFNCNLAQNLYST 150
>U40061-4|AAA81151.3| 239|Caenorhabditis elegans Hypothetical
protein ZK563.5 protein.
Length = 239
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 344 DGVKAHDLEGKAAISNQTNAKVFEILKSAGIKTAFVKIASETAFLSKKC 490
D + HD++ A+ NA+VF L + GIK A AS +C
Sbjct: 51 DAIDKHDVDTLCAMWESWNARVFHSLDTEGIKQAQCYEASAYRLFLVRC 99
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 494 MIPIEWVTRRLATGSFLKRNPGVPE 568
M+P++W +R A+ S R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 494 MIPIEWVTRRLATGSFLKRNPGVPE 568
M+P++W +R A+ S R+PG PE
Sbjct: 1278 MVPLDWWSRYYASMSQFHRSPGYPE 1302
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 115 YKRPSLLHTFVARSPPYWKLASF 183
Y+RP L H FVA++ Y K +F
Sbjct: 1147 YQRPKLKHQFVAKNAKYCKKCTF 1169
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 115 YKRPSLLHTFVARSPPYWKLASF 183
Y+RP L H FVA++ Y K +F
Sbjct: 1147 YQRPKLKHQFVAKNAKYCKKCTF 1169
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 573 SXFTPPKQETFFKDDANHDPQWSE 644
S + PP ++T DD+ HD W E
Sbjct: 102 SFYRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform b protein.
Length = 1234
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 573 SXFTPPKQETFFKDDANHDPQWSE 644
S + PP ++T DD+ HD W E
Sbjct: 102 SFYRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-12|AAK68550.1| 1160|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform a protein.
Length = 1160
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 573 SXFTPPKQETFFKDDANHDPQWSE 644
S + PP ++T DD+ HD W E
Sbjct: 102 SFYRPPGEDTAGSDDSEHDAGWIE 125
>AC025724-11|AAM97979.1| 1137|Caenorhabditis elegans Membrane
calcium atpase protein3, isoform c protein.
Length = 1137
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 573 SXFTPPKQETFFKDDANHDPQWSE 644
S + PP ++T DD+ HD W E
Sbjct: 102 SFYRPPGEDTAGSDDSEHDAGWIE 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,178,152
Number of Sequences: 27780
Number of extensions: 407764
Number of successful extensions: 951
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -