Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H10
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 39 0.006
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 34 0.16
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 34 0.16
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.66
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 32 0.66
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.7
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 6.2
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 26 8.4
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 38.7 bits (86), Expect = 0.006
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP GG + PPP PPP G P
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGP 66
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPPXXXG 504
G G PPP G GG F PPP PPP G
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG--FMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPPXXXG 504
G G PPP G GG F PPP PPP G
Sbjct: 652 GSGGGSSMPMPVPPPGGLGG--FMPPPPPPPPMPG 684
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP GG PPP PPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP GG PPP PP G P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPPXXXGAP 510
GG PPPPG PP PPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP G F PP PPP AP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPPG PPP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPP 732
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP G PPP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP GG PPP PPP
Sbjct: 772 PPPPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP GG PPP PP G P
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPPXXXGAP 510
GG PPPPG PP PPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP G F PP PPP AP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPPG PPP PPP
Sbjct: 714 PPPPGLPPITGGPPPPPPP 732
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP G PPP PPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPP 777
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.50
Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Frame = +3
Query: 438 PPPXXGGXXFXXPXXXXPXXXRCPXFVGXGGGFXPPXGGXWXSPXTRG--XXGXXXF--- 602
PPP G P P P G GG+ PP G +P + G G F
Sbjct: 380 PPPQSGPPGAFAPP---PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP 436
Query: 603 VXGGXPRXXPPXTXXLFGFXPXGXPP 680
GG PP T GF P G PP
Sbjct: 437 PPGGPGAYGPPPT----GFPPVGAPP 458
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = -3
Query: 580 PRVWGEXQXPPXGGXKPPPXPTNXGHRXXXGXXXXGXXKXXPPXXGGGGXXXXXKXXXXP 401
P +G Q P G PP P G G G PP GG G P
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Query: 400 PG 395
G
Sbjct: 454 VG 455
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +1
Query: 397 RGGXGXFXXXXXXPPPPGXGGXFFXPPP------XPPPXXXGAP 510
+GG G F PPPPG G + PP PPP GAP
Sbjct: 427 QGGPGGFG-----PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP GG PPP PPP
Sbjct: 355 PPPPPPGGFKGGPPPPPPP 373
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP GG PPP PP G P
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPPXXXGAP 510
GG PPPPG PP PPP G P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP G F PP PPP AP
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPPG PPP PPP
Sbjct: 297 PPPPGLPPITGGPPPPPPP 315
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPP 492
PPPP G PPP PPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPP 360
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 439 PPPGXGGXFFXPPPXPPPXXXGAP 510
P G GG PPP PPP GAP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.9 bits (69), Expect = 0.66
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 439 PPPGXGGXFFXPPPXPPPXXXGAP 510
P G GG PPP PPP GAP
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGAP 43
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP G + PPP PP G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP G + PPP PP G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPP 321
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 435 PPPPXXGGXXFXXPXXXXPXXXRCPXFVGXGGGFXPPXGGXWXSPXTRGXXGXXXFVXGG 614
PPPP GG P P P G PP G P G
Sbjct: 280 PPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 338
Query: 615 XPRXXPPXTXXLFGFXPXGXPP 680
P PP G P G PP
Sbjct: 339 APERSPPTGSPPTGSPPTGRPP 360
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 619 GXPPXTKXFXPXXPRVWGEXQXPPXGGXKPPP 524
G PP + P P G PP GG PPP
Sbjct: 262 GSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 435 PPPPXXGGXXFXXPXXXXPXXXRCPXFVGXGGGFXPPXGGXWXSPXTRGXXGXXXFVXGG 614
PPPP GG P P P G PP G P G
Sbjct: 301 PPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 359
Query: 615 XPRXXPPXTXXLFGFXPXGXPP 680
P PP G P G PP
Sbjct: 360 APERSPPTGSPPTGSPPTGRPP 381
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 619 GXPPXTKXFXPXXPRVWGEXQXPPXGGXKPPP 524
G PP + P P G PP GG PPP
Sbjct: 283 GSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/82 (28%), Positives = 23/82 (28%)
Frame = +3
Query: 435 PPPPXXGGXXFXXPXXXXPXXXRCPXFVGXGGGFXPPXGGXWXSPXTRGXXGXXXFVXGG 614
PPPP GG P P P G PP G P G
Sbjct: 286 PPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQ 344
Query: 615 XPRXXPPXTXXLFGFXPXGXPP 680
P PP G P G PP
Sbjct: 345 APERSPPTGSPPTGSPPTGRPP 366
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 619 GXPPXTKXFXPXXPRVWGEXQXPPXGGXKPPP 524
G PP + P P G PP GG PPP
Sbjct: 268 GSPPPPRTGSPPPPPT-GSPPPPPAGGSPPPP 298
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 779 PPXXPPFXPPFXFXXKX---VPXXXPXGXXGGXFXXXPPGGV-XPPGXG 913
P PPF PF + VP P GG PPGG+ PPG G
Sbjct: 130 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHG 178
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Frame = +2
Query: 779 PPXXPPFXPPFXFXXKX---VPXXXPXGXXGGXFXXXPPGGV-XPPGXG 913
P PPF PF + VP P GG PPGG+ PPG G
Sbjct: 410 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHG 458
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 439 PPPGXGGXFFXPPPXPPPXXXGAP 510
P G GG PPP PPP G P
Sbjct: 20 PSGGGGGCGCAPPPPPPPCGCGGP 43
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAPXS 516
PPPP GG PPP PPP P S
Sbjct: 581 PPPPMLGGP---PPPPPPPGGLMGPAS 604
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
Frame = +1
Query: 436 PPPPGXGGXFFXPP------PXPPPXXXGAP 510
PPPPG GG PP P PPP G P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP 105
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 6/29 (20%)
Frame = +1
Query: 436 PPPPGXGGX------FFXPPPXPPPXXXG 504
PPPP GG F PPP PPP G
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 631 GXXLGXPPXTKXFXPXXPRVWGEXQXPPXGGXKPPPXP 518
G + PP P PR+ G PP G PPP P
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +1
Query: 436 PPP---PGXGGXFFXPPPXPPPXXXGAPXS 516
PPP P G PPP PPP G P S
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPPPSGAGGPAS 665
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = +1
Query: 436 PPP---PGXGGXFFXPPPXPPPXXXGAPXS 516
PPP P G PPP PPP G P S
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPPPSGAGGPAS 491
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXG 504
PPPP G PPP PPP G
Sbjct: 41 PPPPPMCGCAPPPPPPPPPPMCG 63
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 400 GGXGXFXXXXXXPPPPGXGGXFFXPPPXPPP 492
GG PPPP G PPP PPP
Sbjct: 30 GGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3
Query: 631 GXXLGXPPXTKXFXPXXPRVWGEXQXPPXGGXKPPPXP 518
G + PP P PR+ G PP G PPP P
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPP F PPP PPP P
Sbjct: 208 PPPLPPNSQFMTPPPRPPPAPFSIP 232
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 914 PXPPGGXHPXGGXXKKXPPXPP--XXKXGEPFXP 819
P PGG P G K PP PP GEP P
Sbjct: 176 PGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRP 209
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 491 GGGXGG-GXKXXPPXPGGGGXXXXXKXXPXPPRXREKKK 378
GGG GG G PP GGG P PP+ K +
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPR 653
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 491 GGGXGG-GXKXXPPXPGGGGXXXXXKXXPXPPRXREKKK 378
GGG GG G PP GGG P PP+ K +
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPR 653
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPP PPP PPP AP
Sbjct: 1345 PPPPSDDLTPVPPPPPPPPTMSKAP 1369
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPPPXXXGAP 510
PPPPG G PP PPP G P
Sbjct: 707 PPPPGIPGY----PPAPPPPGVGPP 727
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 509 GAPXXXGGGXGGGXKXXPPXPGGGG 435
G GGG GGG PP P GG
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPPACGG 63
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 509 GAPXXXGGGXGGGXKXXPPXPGGGG 435
G GGG GGG PP P GG
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 509 GAPXXXGGGXGGGXKXXPPXPGGGGXXXXXKXXPXPP 399
G GGG GGG GGGG P PP
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 397 RGGXGXFXXXXXXPPP--PGXGGXFFXP--PPXPPPXXXGAP 510
RGG G PPP PG GG + P P P GAP
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 544 GGXKPPPXPTNXGHRXXXGXXXXGXXKXXPPXXGGGG 434
GG PPP P G G G PP GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 544 GGXKPPPXPTNXGHRXXXGXXXXGXXKXXPPXXGGGG 434
GG PPP P G G G PP GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 397 RGGXGXFXXXXXXPPP--PGXGGXFFXP--PPXPPPXXXGAP 510
RGG G PPP PG GG + P P P GAP
Sbjct: 784 RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRVPTPSNGAP 825
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Frame = -2
Query: 503 PXXXGGGXGGGXKXXPPXPGGGGXXXXXKXXPXPPRXRE---KKKXNAGGG 360
P G G G PP G G P PP R N GGG
Sbjct: 505 PRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGG 555
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 912 PXPGGXTPPGGXXKKXPPXXP 850
P PGG PPG + PP P
Sbjct: 812 PYPGGPVPPGPPQNRMPPPPP 832
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 439 PPPGXGGXFFXPPP-XPPPXXXGAP 510
PPPG G F PPP PP G P
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMP 107
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 439 PPPGXGGXFFXPPP-XPPPXXXGAP 510
PPPG G F PPP PP G P
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMP 130
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +1
Query: 439 PPPGXGGXFFXPPP-XPPPXXXGAP 510
PPPG G F PPP PP G P
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMP 380
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 25.8 bits (54), Expect(2) = 8.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 436 PPPPGXGGXFFXPPPXPP 489
PPPP G PPP PP
Sbjct: 539 PPPPPVGMANGGPPPPPP 556
Score = 20.6 bits (41), Expect(2) = 8.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 472 PPPXPPP 492
PPP PPP
Sbjct: 576 PPPPPPP 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,747,116
Number of Sequences: 27780
Number of extensions: 273885
Number of successful extensions: 2280
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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