BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H04
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 225 2e-59
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 225 2e-59
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 217 1e-56
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 215 3e-56
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 37 0.016
U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 29 3.3
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 29 3.3
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 29 3.3
AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical ... 29 3.3
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 29 5.7
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 10.0
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 28 10.0
AJ561208-1|CAD99210.1| 278|Caenorhabditis elegans NAS-15 protei... 28 10.0
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 28 10.0
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 225 bits (551), Expect = 2e-59
Identities = 115/137 (83%), Positives = 119/137 (86%), Gaps = 2/137 (1%)
Frame = +2
Query: 176 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 355
KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVI
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVI 64
Query: 356 SSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 535
SSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA ESKVFYLKMK
Sbjct: 65 SSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFYLKMK 124
Query: 536 GDYYR--VPCRSGHRRN 580
GDYYR SG RN
Sbjct: 125 GDYYRYLAEVASGDDRN 141
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +3
Query: 513 KCFTSK*KEITTGYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIR 671
K F K K YLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIR
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIR 169
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 691 FSVFYYEILNSPDKACQLAXQ 753
FSVF+YEILN+PDKACQLA Q
Sbjct: 176 FSVFFYEILNAPDKACQLAKQ 196
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 225 bits (551), Expect = 2e-59
Identities = 115/137 (83%), Positives = 119/137 (86%), Gaps = 2/137 (1%)
Frame = +2
Query: 176 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 355
KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVI
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSSWRVI 64
Query: 356 SSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 535
SSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA ESKVFYLKMK
Sbjct: 65 SSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFYLKMK 124
Query: 536 GDYYR--VPCRSGHRRN 580
GDYYR SG RN
Sbjct: 125 GDYYRYLAEVASGDDRN 141
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/62 (67%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Frame = +1
Query: 691 FSVFYYEILNSPDKACQLAXQAFDDAIAELDTLNEDRTR-FYVNMQLLRDT-DAWTXXTQ 864
FSVF+YEILN+PDKACQLA QAFDDAIAELDTLNED + + MQLLRD WT
Sbjct: 176 FSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAA 235
Query: 865 GD 870
D
Sbjct: 236 TD 237
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +3
Query: 513 KCFTSK*KEITTGYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIR 671
K F K K YLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIR
Sbjct: 117 KVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIR 169
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 217 bits (529), Expect = 1e-56
Identities = 108/124 (87%), Positives = 114/124 (91%)
Frame = +2
Query: 179 EELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVIS 358
EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVIS
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVIS 65
Query: 359 SIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKG 538
SIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA ESKVFYLKMKG
Sbjct: 66 SIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFYLKMKG 125
Query: 539 DYYR 550
DYYR
Sbjct: 126 DYYR 129
Score = 77.0 bits (181), Expect = 2e-14
Identities = 40/56 (71%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +1
Query: 691 FSVFYYEILNSPDKACQLAXQAFDDAIAELDTLNEDRTR-FYVNMQLLRDT-DAWT 852
FSVFYYEILN+P+ ACQLA QAFDDAIAELDTLNED + + MQLLRD WT
Sbjct: 175 FSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 230
Score = 58.8 bits (136), Expect = 5e-09
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +3
Query: 513 KCFTSK*KEITTGYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIR 671
K F K K YLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIR
Sbjct: 117 KVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIR 168
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 215 bits (525), Expect = 3e-56
Identities = 107/124 (86%), Positives = 113/124 (91%)
Frame = +2
Query: 179 EELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVIS 358
EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEERNLLSVAYKNVVGARRSSWRVIS
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSSWRVIS 65
Query: 359 SIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKG 538
SIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA ESK FYLKMKG
Sbjct: 66 SIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFYLKMKG 125
Query: 539 DYYR 550
DYYR
Sbjct: 126 DYYR 129
Score = 77.0 bits (181), Expect = 2e-14
Identities = 40/56 (71%), Positives = 44/56 (78%), Gaps = 2/56 (3%)
Frame = +1
Query: 691 FSVFYYEILNSPDKACQLAXQAFDDAIAELDTLNEDRTR-FYVNMQLLRDT-DAWT 852
FSVFYYEILN+P+ ACQLA QAFDDAIAELDTLNED + + MQLLRD WT
Sbjct: 175 FSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 230
Score = 59.3 bits (137), Expect = 4e-09
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +3
Query: 513 KCFTSK*KEITTGYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIR 671
K F K K YLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIR
Sbjct: 117 KAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIR 168
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3
Query: 582 RHSVVEDSQKAYQDAFEISKAKMQPTHPIR 671
R S+ AYQ+A I+K KMQPTHPIR
Sbjct: 17 REEHAHKSRIAYQEALGIAKDKMQPTHPIR 46
>U40933-5|AAA81675.1| 1116|Caenorhabditis elegans Hypothetical protein
F20D12.2 protein.
Length = 1116
Score = 34.7 bits (76), Expect = 0.087
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Frame = +2
Query: 188 VQRAKLAEQAERYDDMAAAMKEVTETGVE-LSNEERNLLSVAYKNVVG---ARR-SSWRV 352
V+R K E A R + M V + + ++NEE + K ++ AR+ +V
Sbjct: 693 VERLKRLELATREKLIQKLMTGVIDQVIHGIANEETMKAKIVRKQMLAIENARKLKEEQV 752
Query: 353 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 532
E+K + E+++ +AKE +KVEKE+ E + ++D + + E K+ + ++
Sbjct: 753 RLENEKKLKRIEQEKNIAKELVLKVEKEISENALRM--IIDDEIRRERRERERKMAH-EI 809
Query: 533 KGDYYRVPCRSGHRRNQTFC 592
G ++RV +S ++ C
Sbjct: 810 VGKFWRVVLKSVDNHVKSIC 829
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 3.3
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +2
Query: 176 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 355
K LVQR + A E+ + + A ++V E R+ A K G + +
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733
Query: 356 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL-IPK 493
SIE+ KTE +K+ E R K E++L + + L+KH +PK
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPK 783
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = +2
Query: 173 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 352
+ E+L+ K E + ++ A +E + E E + V K V A +V
Sbjct: 895 ENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE-KEKVKAEEEKVKV 953
Query: 353 ISSIEQKTEGSERKQQMAKEYRVKVEKE 436
++ +E ++ A+E +VK+EKE
Sbjct: 954 EKERNKEKVKAEEERLKAEEEKVKIEKE 981
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +2
Query: 200 KLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE 379
K EQ + + A +K++ E +L E+ A K+ + A++ R+ ++K E
Sbjct: 954 KALEQRKAKKEEAERLKKLEE---KLKKEKEKQ---AEKDRIEAKKFEERMKKE-QEKQE 1006
Query: 380 GSERKQQMAKEYRVKVEKELREI 448
ERK++ +E + + E+E+REI
Sbjct: 1007 EKERKEREKREEKERKEREIREI 1029
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 29.5 bits (63), Expect = 3.3
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = +2
Query: 176 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 355
K LVQR + A E+ + + A ++V E R+ A K G + +
Sbjct: 683 KTLLVQRLQTALDTEKAAEASVAARDV---------EMRDAAENAVKQEGGEENPAAFIA 733
Query: 356 SSIEQ---KTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL-IPK 493
SIE+ KTE +K+ E R K E++L + + L+KH +PK
Sbjct: 734 PSIEETKAKTEAEAKKEAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPK 783
>AF039713-2|AAB96726.2| 476|Caenorhabditis elegans Hypothetical
protein F57B10.9 protein.
Length = 476
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Frame = +2
Query: 248 KEVTETGVELSNEERNLLSVAYKN--VVGARRSSW-------RVISSIEQKTE 379
KE E ELS EE+N +S N + G ++ +W RVIS +E E
Sbjct: 237 KEQAEPSTELSKEEKNRISTTISNFLIKGGQKIAWGVETTTVRVISRVEDNGE 289
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 260 ETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVE 430
+ VELSN+ N + Y V + ++ +S E+KT +E + + EY VK E
Sbjct: 97 DVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDNI--EYGVKTE 151
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 703 KRLRKFNARPSLMGCVGCIFALLI 632
+ L+ F +PS+MGC C+ +LI
Sbjct: 177 QELKNFCKKPSIMGCCLCLLLILI 200
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 314 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 412
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 544 LQGTLQKWPQEKPDILL*RIHRKHTKMLLKSARRKCSPHTP*GWVWR*IFSVFYYEILNS 723
++ LQ WP+ + + + +++ L+ ++ ++ + HT WV + V Y I
Sbjct: 116 IKNRLQLWPEGRIPYTISSQYSSYSRSLIAASMQEYASHTCIRWVPKEAADVNYVHIY-- 173
Query: 724 PDKAC 738
PD+ C
Sbjct: 174 PDRGC 178
>AJ561208-1|CAD99210.1| 278|Caenorhabditis elegans NAS-15 protein
protein.
Length = 278
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = +1
Query: 544 LQGTLQKWPQEKPDILL*RIHRKHTKMLLKSARRKCSPHTP*GWVWR*IFSVFYYEILNS 723
++ LQ WP+ + + + +++ L+ ++ ++ + HT WV + V Y I
Sbjct: 10 IKNRLQLWPEGRIPYTISSQYSSYSRSLIAASMQEYASHTCIRWVPKEAADVNYVHIY-- 67
Query: 724 PDKAC 738
PD+ C
Sbjct: 68 PDRGC 72
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/79 (20%), Positives = 34/79 (43%)
Frame = +2
Query: 635 QQGENAAHTPHKAGSGVKFSQSFIMRY*IRQTRRVNSPNRLSTMPSPNWTH*TKIVQDST 814
+Q H P K G ++ + +++RY ++ + L S + ++ +
Sbjct: 669 RQCNKVPHWPLKCGDFAEWDEKWLLRYAVKNAQGAGDQTLLQVACSCGKEVYSSLLPEEF 728
Query: 815 LICSCCEILTLGRXTLKAM 871
LIC C+I T+ T+ +
Sbjct: 729 LICPNCKI-TIDTHTMSTV 746
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,625,561
Number of Sequences: 27780
Number of extensions: 382887
Number of successful extensions: 1134
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -