Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_H02
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 217 2e-57
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 133 3e-32
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 130 2e-31
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 88 1e-18
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 60 5e-10
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 56 5e-09
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 50 4e-07
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 48 2e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 40 6e-04
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 34 0.030
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 27 2.6
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 27 3.4
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 3.4
SPAC1296.04 |mug65||spore wall assembly protein |Schizosaccharom... 27 4.5
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 217 bits (530), Expect = 2e-57
Identities = 104/122 (85%), Positives = 111/122 (90%)
Frame = +2
Query: 470 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 649
KMTQI+FETFN+PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+R
Sbjct: 118 KMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMR 177
Query: 650 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVXLDFEQEMATXXXXXXXE 829
LDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYV LDFEQE+ T E
Sbjct: 178 LDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLE 237
Query: 830 KS 835
KS
Sbjct: 238 KS 239
Score = 159 bits (387), Expect = 4e-40
Identities = 69/74 (93%), Positives = 72/74 (97%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 423
+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 IMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 424 VLLTEAPLNPKANR 465
LLTEAPLNPK+NR
Sbjct: 103 CLLTEAPLNPKSNR 116
Score = 43.6 bits (98), Expect = 4e-05
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +2
Query: 149 NGSGMCKAGFAGDDAPRRRLP 211
NGSGMCKAGFAGDDAPR P
Sbjct: 12 NGSGMCKAGFAGDDAPRAVFP 32
Score = 34.3 bits (75), Expect = 0.023
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +3
Query: 195 PDAVFPSIVGRPRHQG 242
P AVFPSIVGRPRH G
Sbjct: 27 PRAVFPSIVGRPRHHG 42
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 133 bits (322), Expect = 3e-32
Identities = 61/107 (57%), Positives = 79/107 (73%)
Frame = +2
Query: 470 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 649
KM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + R
Sbjct: 118 KMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGR 177
Query: 650 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVXLDFE 790
LD+AGRD T YL+ +L +GY+F TA+ E VR++KEKLCYV D E
Sbjct: 178 LDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLE 224
Score = 81.0 bits (191), Expect = 2e-16
Identities = 32/67 (47%), Positives = 51/67 (76%)
Frame = +1
Query: 265 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 444
KD VGDEA++ R +L +KYP+E+GII ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 445 LNPKANR 465
+NP ANR
Sbjct: 110 MNPVANR 116
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 149 NGSGMCKAGFAGDDAPRRRLP 211
NG+G K G+A D+ PR + P
Sbjct: 10 NGTGFVKVGYAKDNFPRFQFP 30
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 130 bits (314), Expect = 2e-31
Identities = 57/110 (51%), Positives = 83/110 (75%)
Frame = +2
Query: 470 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 649
K+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI +
Sbjct: 123 KIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQ 182
Query: 650 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVXLDFEQEM 799
++ GRD+TDYL L + G+ ++AE+EIVR+IKEK CYV DF E+
Sbjct: 183 EEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEI 232
Score = 82.6 bits (195), Expect = 7e-17
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +1
Query: 244 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEH 420
VM QKD +VG EAQ+ RG+L ++ PIE GII NW DME+IW + + + +L PEEH
Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106
Query: 421 PVLLTEAPL 447
P+LLTE PL
Sbjct: 107 PLLLTEPPL 115
Score = 33.9 bits (74), Expect = 0.030
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 149 NGSGMCKAGFAGDDAPRRRLP 211
NGSG KAGFAGDD P+ P
Sbjct: 16 NGSGFIKAGFAGDDIPKCLFP 36
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 88.2 bits (209), Expect = 1e-18
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 10/118 (8%)
Frame = +2
Query: 479 QIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALP 634
+IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY +
Sbjct: 144 EIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIG 203
Query: 635 HAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYVXLDFEQEMA 802
+I + LAGRD+T ++ +L +R S TAER IKE+ CYV D +E +
Sbjct: 204 SSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFS 256
Score = 72.5 bits (170), Expect = 7e-14
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 268 DSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 444
D ++G++A K +L YPI HG I NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 445 LNPKANR 465
LNP NR
Sbjct: 133 LNPPENR 139
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 149 NGSGMCKAGFAGDDAPRRRLP 211
NG+G K G+AG+DAP P
Sbjct: 12 NGTGYSKLGYAGNDAPSYVFP 32
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 59.7 bits (138), Expect = 5e-10
Identities = 27/77 (35%), Positives = 49/77 (63%)
Frame = +2
Query: 569 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 748
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 749 DIKEKLCYVXLDFEQEM 799
+IKE +CYV +F+++M
Sbjct: 217 EIKESVCYVSQNFKEDM 233
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 56.4 bits (130), Expect = 5e-09
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 473 MTQIMFETFNSPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAIL 646
MT+++FE +N+P++ I + S Y + + ++GIVL+ G+ SH +P+ G +
Sbjct: 134 MTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAK 193
Query: 647 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVXLDFEQEMA 802
R+ G + YL+K+ + SF + C+V D+ ++A
Sbjct: 194 RISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIA 245
Score = 42.7 bits (96), Expect = 6e-05
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 256 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 432
+ + + VG++ + G ++ + P E +I+NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 433 TEAPLNP 453
TE NP
Sbjct: 121 TEPLANP 127
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 50.0 bits (114), Expect = 4e-07
Identities = 29/95 (30%), Positives = 46/95 (48%)
Frame = +2
Query: 476 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 655
TQ FE P +A + ++ LYA G G+V+D G + PI +G + A +L
Sbjct: 166 TQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLP 225
Query: 656 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 760
L GR +T +L +L E + ++ + DI E
Sbjct: 226 LGGRYMTQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 47.6 bits (108), Expect = 2e-06
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 470 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 649
K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 116 KTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQV 175
Query: 650 LDLAGRDLTDYLMKILTERGY 712
+G + D L + L ++ +
Sbjct: 176 QHFSGNAINDILAQTLRDKNF 196
Score = 46.0 bits (104), Expect = 7e-06
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 310 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 465
+ +K I +G + NWD +W + +L+ P EHP+L+TE NP NR
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENR 114
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 265 KDSYVGDEAQSKRGI--LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 438
++ YV DE Q I + +K +GII +W+ W +L+V P E+ +++TE
Sbjct: 49 RNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITE 108
Query: 439 APLNPKANRXE 471
NP++ R +
Sbjct: 109 PSWNPQSVRQQ 119
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 33.9 bits (74), Expect = 0.030
Identities = 16/83 (19%), Positives = 41/83 (49%)
Frame = +2
Query: 470 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 649
K+ I+F + + +++ + + +G + V+D G + + EG +P++ ++
Sbjct: 261 KILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIK 320
Query: 650 LDLAGRDLTDYLMKILTERGYSF 718
++ G D+T MK+L + +
Sbjct: 321 INYGGDDITLLFMKLLMRSHFPY 343
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 229 LATRAVMVGMGQKDSYVGDEAQSKRGILTLKYPI 330
L+ A+M+G +Y+G AQ KR +LT + I
Sbjct: 160 LSQYAIMIGAIHGFAYIGLAAQGKRALLTARVTI 193
>SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1369
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 120 TTMLLRL*STMAPACARPVSPATTRPDAVFPSIVG 224
T M+ +L + AR VSP T P VFP + G
Sbjct: 1294 TLMISQLAGSATSILARFVSPTKTGPANVFPDLTG 1328
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 286 RHPRRSLSGPYRPSRPWWRGRPTMDGKTASGRVVAGETG 170
RHP+ S +P R P GKT R VA ETG
Sbjct: 245 RHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETG 283
>SPAC1296.04 |mug65||spore wall assembly protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 612 STKVTLCPTPSSVWTW 659
STK CP PS W W
Sbjct: 52 STKTATCPDPSWEWAW 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,081,796
Number of Sequences: 5004
Number of extensions: 61055
Number of successful extensions: 222
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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