SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G24
         (934 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   285   2e-77
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   285   2e-77
AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical ...   126   3e-29
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   118   6e-27
U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase su...    66   4e-11
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    56   5e-08
AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily a...    46   3e-05
AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical ...    34   0.13 
Z92972-5|CAB07484.1|  212|Caenorhabditis elegans Hypothetical pr...    32   0.67 
AL021566-5|CAA16500.1|  212|Caenorhabditis elegans Hypothetical ...    32   0.67 
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    31   1.6  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    31   1.6  
U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical ...    30   2.7  
AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  285 bits (700), Expect = 2e-77
 Identities = 139/170 (81%), Positives = 153/170 (90%)
 Frame = +1

Query: 259 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 438
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 7   SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 66

Query: 439 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 618
           L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI    
Sbjct: 67  LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 126

Query: 619 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVQIGRGQRELIIGDRQTGK 768
           R RV +KAPGIIPR+SVREPM TG+KAVDSLV IGRGQRELIIGDRQTGK
Sbjct: 127 RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGK 176


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  285 bits (700), Expect = 2e-77
 Identities = 139/170 (81%), Positives = 153/170 (90%)
 Frame = +1

Query: 259 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 438
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 439 LEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKS 618
           L+ DNVGVVVFGNDK+I+EGDIVKRTGAIVDVPVG+ +LGRVVDALGNPIDGKGPI    
Sbjct: 94  LDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPIANAR 153

Query: 619 RMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVQIGRGQRELIIGDRQTGK 768
           R RV +KAPGIIPR+SVREPM TG+KAVDSLV IGRGQRELIIGDRQTGK
Sbjct: 154 RSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGK 203


>AL023815-2|CAD92383.1|  146|Caenorhabditis elegans Hypothetical
           protein H28O16.1b protein.
          Length = 146

 Score =  126 bits (303), Expect = 3e-29
 Identities = 60/76 (78%), Positives = 68/76 (89%)
 Frame = +1

Query: 259 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 438
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 439 LEPDNVGVVVFGNDKL 486
           L+ DNVGVVVFGNDK+
Sbjct: 94  LDVDNVGVVVFGNDKI 109



 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = +3

Query: 639 GARYHSPGVCA*AYADWYQGC*LSGTNWPWS 731
           G R H   VCA     W QG   S  NW W+
Sbjct: 115 GPRNHPTFVCARTNGYWSQGRRFSCANWTWT 145


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  118 bits (284), Expect = 6e-27
 Identities = 57/73 (78%), Positives = 64/73 (87%)
 Frame = +1

Query: 259 AEISTILEERILGAAPKADLEETGRVLSIGDGIARVYGLKNIQAEEMVEFSSGLKGMALN 438
           +E+S ILEERILG     +LEETG+VLSIGDGIARVYGLKNIQAEEMVEF SG+KGMA+N
Sbjct: 34  SEVSKILEERILGTETGINLEETGKVLSIGDGIARVYGLKNIQAEEMVEFDSGIKGMAMN 93

Query: 439 LEPDNVGVVVFGN 477
           L+ DNVGVVV GN
Sbjct: 94  LDVDNVGVVVLGN 106



 Score =  114 bits (274), Expect = 1e-25
 Identities = 75/171 (43%), Positives = 101/171 (59%), Gaps = 6/171 (3%)
 Frame = +1

Query: 274 ILEERILGAAPKADLEETGRVLSIGDGIARVYG--LKNIQAEEMVEFSSGLK----GMAL 435
           +L +RI+ A   A   +   + +   G+A   G  +  I  E ++   +G+     G  L
Sbjct: 1   MLSKRIVTALNTAVKVQNAGIATTARGMAGASGSEVSKILEERILGTETGINLEETGKVL 60

Query: 436 NLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTK 615
           ++  D +  V +G  K I+  ++V+    I  + +   +    V  LGNPIDGKGPI   
Sbjct: 61  SIG-DGIARV-YGL-KNIQAEEMVEFDSGIKGMAMNLDVDNVGVVVLGNPIDGKGPIANA 117

Query: 616 SRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVQIGRGQRELIIGDRQTGK 768
            R RV +KAPGIIPR+SVREPM TG+KAVDSLV IGRGQRELIIGDRQTGK
Sbjct: 118 RRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVPIGRGQRELIIGDRQTGK 168


>U10402-2|AAA19068.2|  538|Caenorhabditis elegans Atp synthase
           subunit protein 2 protein.
          Length = 538

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 34/103 (33%), Positives = 57/103 (55%)
 Frame = +1

Query: 460 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIK 639
           + + G + L++ G  V  TG  + +PVG + LGR+++ +G PID +GPI +K+   +  +
Sbjct: 120 IAMDGTEGLVR-GQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAE 178

Query: 640 APGIIPRVSVREPMQTGIKAVDSLVQIGRGQRELIIGDRQTGK 768
           AP  +     +E + TGIK VD L    +G +  + G    GK
Sbjct: 179 APEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGK 221


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
 Frame = +1

Query: 424 GMALNLEPDNVGVVVF-GNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPIDGKG 600
           G  L +  +   V VF G   +  +  I + TG I+  PV E +LGR+ +  G PID   
Sbjct: 66  GQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGP 125

Query: 601 PIDTKSRMRVGIKAPGIIPRVSVREPMQTGIKAVDSLVQIGRGQR 735
           P+  +  + +  +      R+   E +QTGI A+D +  I RGQ+
Sbjct: 126 PVLAEDFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 170


>AC006708-2|AAF60418.1|  501|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 300 protein.
          Length = 501

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +1

Query: 514 TGAIVDVPVGEQILGRVVDALGNPIDGKGPIDTKSRMRVGIKAPGIIPRVSVREPMQTGI 693
           TG I   PV   +LGR+ +  G PID   P+  +  + +  +      R+   E +QTGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168

Query: 694 KAVDSLVQIGRGQR 735
            A+D +  I RGQ+
Sbjct: 169 SAIDVMNSIARGQK 182


>AL033512-1|CAA22076.1|  606|Caenorhabditis elegans Hypothetical
           protein Y49A3A.2 protein.
          Length = 606

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = +1

Query: 418 LKGMALNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEQILGRVVDALGNPI 588
           L G  + LE D   + V+     +  GD V RTG  + V +G  I+G + D +  P+
Sbjct: 39  LVGEIIRLEGDYATIQVYEETSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPL 95


>Z92972-5|CAB07484.1|  212|Caenorhabditis elegans Hypothetical
           protein T19C9.5 protein.
          Length = 212

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = -2

Query: 639 LNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDN--ISFLDKLVITKY 466
           +N D H   + +   A NR+ Q +Y   K +   G +Y+S   +D+  I++  +L+I KY
Sbjct: 117 INKDTHDALKSEAKAAKNRLRQMLYSKSKSI---GCIYESCDKIDSKGINYNTRLLICKY 173


>AL021566-5|CAA16500.1|  212|Caenorhabditis elegans Hypothetical
           protein F08E10.7 protein.
          Length = 212

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 639 LNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDSTSTLDN--ISFLDKLVITKY 466
           +N D H   + +     NR+ Q +Y   K +   G +Y+S   +D+  I++  +LVI KY
Sbjct: 117 INKDTHNALKSEEKATKNRLRQMLYSKSKSI---GCIYESCDKIDSKGINYNTRLVICKY 173


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +1

Query: 364 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 540
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 541 GEQILGR-VVDAL 576
              ++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +1

Query: 364 VYGLKNIQAEEMVEFSSGLKGMALNLEPDNVGVVVFGNDK-LIKEGDIVKRTGAIVDVPV 540
           + GL  +Q+  + E   G+K +  +L   +       +DK LIK G I+ +   I  VP+
Sbjct: 631 IAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKDHSSDKDLIKYGSILSKASEITGVPI 690

Query: 541 GEQILGR-VVDAL 576
              ++G+ VV AL
Sbjct: 691 DTSLIGKSVVPAL 703


>U64858-4|AAB18282.2|  151|Caenorhabditis elegans Hypothetical
           protein C16D9.3 protein.
          Length = 151

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 403 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 314
           PP  Q  C      ER H  C R+DQS+++
Sbjct: 96  PPGSQLKCHFDKSRERLHANCYRYDQSVVN 125


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 403 PPSPQPGCSSSHKHERYHHQCSRHDQSLLD 314
           PP  Q  C   H   +Y+  C R+DQS+++
Sbjct: 285 PPGSQSICIFLHDWNKYYADCFRYDQSIIN 314


>U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical
           protein D1014.7 protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = -2

Query: 642 RLNTDPHTGFRVDWSLAINRVTQSIYYTPKDLLSDGNVYDS---TSTLDN-ISFLDKLVI 475
           R ++ P+     DW++ I + ++ +Y+T   LL+     D    T T +N   F+ K V 
Sbjct: 82  RTDSIPNANRHADWAIQIKKPSKYLYHTSFALLAAFAHRDQIIVTLTSENQFKFVFKTVY 141

Query: 474 TKYYHTH 454
            +YY  H
Sbjct: 142 CRYYDCH 148


>AF100306-1|AAC68921.1|  423|Caenorhabditis elegans Hypothetical
           protein T24C4.2 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 437 LRAIPLRPEENSTISSAWMFFKP*TRAIPSPMLKTRPVSSRSALGAAPRILS 282
           +R IPLRP +NS       F++    +  SP++        S LGAA R+L+
Sbjct: 352 VRPIPLRPSQNSA------FYQMLNSSSTSPIIAVTKAEVDSVLGAASRLLN 397


>AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical
           protein F41B4.1 protein.
          Length = 342

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 412 RRTPPSPQPGCSSSHKHERYHHQCSRHDQSLLDQ 311
           R  PP P P  + SHK+E      SR   S L++
Sbjct: 54  RELPPPPPPRKTPSHKYEEMRRSLSRGPSSTLER 87


>Z75527-3|CAA99777.1|  428|Caenorhabditis elegans Hypothetical
           protein C15C8.3 protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = -2

Query: 447 RFQVKGHSLEA*GELHHLLSLDVLQAINTSDTITNAQDTTSLF*ISLGRGSKD-PLFEDG 271
           R   KG   E   E + LLS   LQ  ++S  + + +D   +  ISLG  +++  LF D 
Sbjct: 32  RMNAKGKLAEYEKERNELLSKKSLQLASSSSPVIDYEDMAYMVQISLGSPAQNFVLFIDS 91

Query: 270 GDLGSFV 250
           G    +V
Sbjct: 92  GSSNLWV 98


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,903,563
Number of Sequences: 27780
Number of extensions: 421140
Number of successful extensions: 1392
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -