Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G23
(970 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 35 0.020
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.32
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.32
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.75
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.98
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 27 5.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 6.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 9.2
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 34.7 bits (76), Expect = 0.020
Identities = 30/130 (23%), Positives = 34/130 (26%)
Frame = +2
Query: 254 GGHPPXXXPXFXPRXXHRPPXPKNXXXXGXNXPPPXXXPPTXGXXPXXXGPXGXXPLKPP 433
G H P P H PP P + PPP P P + PP
Sbjct: 217 GEHMPPPPMHHEP-GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Query: 434 PXXTKNXSXXPPXXXPPGGPXXXPXXPKXXXXXKXGGXXXKXXXXXPXXGGXXPPPPXFX 613
P + PP PP P + G PPP
Sbjct: 276 PMHHEPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 332
Query: 614 XXXXXPPPPF 643
PPPPF
Sbjct: 333 PGEHMPPPPF 342
Score = 31.5 bits (68), Expect = 0.18
Identities = 31/146 (21%), Positives = 36/146 (24%)
Frame = +2
Query: 302 HRPPXPKNXXXXGXNXPPPXXXPPTXGXXPXXXGPXGXXPLKPPPXXTKNXSXXPPXXXP 481
H PP P + PPP P P + PPP + PP P
Sbjct: 206 HMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP---P 262
Query: 482 PGGPXXXPXXPKXXXXXKXGGXXXKXXXXXPXXGGXXPPPPXFXXXXXXPPPPFSXSXKX 661
P P + G PPP PPPP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE 322
Query: 662 PXXXXXFXXPPPXKXXVKXKKKKPPP 739
PPP + PPP
Sbjct: 323 -------HMPPPPMHHEPGEHMPPPP 341
Score = 28.3 bits (60), Expect = 1.7
Identities = 30/142 (21%), Positives = 34/142 (23%)
Frame = +2
Query: 350 PPPXXXPPTXGXXPXXXGPXGXXPLKPPPXXTKNXSXXPPXXXPPGGPXXXPXXPKXXXX 529
PPP P P + PPP + PP PP P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHMPPPPMH 265
Query: 530 XKXGGXXXKXXXXXPXXGGXXPPPPXFXXXXXXPPPPFSXSXKXPXXXXXFXXPPPXKXX 709
+ G PPP PPPP PPP
Sbjct: 266 HEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE-------HMPPPPMHH 318
Query: 710 VKXKKKKPPPXXWXGGXGFSPP 775
+ PPP G PP
Sbjct: 319 EPGEHMPPPPMHHEPGEHMPPP 340
Score = 25.8 bits (54), Expect = 9.2
Identities = 26/118 (22%), Positives = 29/118 (24%)
Frame = +2
Query: 422 LKPPPXXTKNXSXXPPXXXPPGGPXXXPXXPKXXXXXKXGGXXXKXXXXXPXXGGXXPPP 601
+ PPP K PP PP P + G PPP
Sbjct: 207 MPPPPMHHKPGEHMPP---PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 602 PXFXXXXXXPPPPFSXSXKXPXXXXXFXXPPPXKXXVKXKKKKPPPXXWXGGXGFSPP 775
PPPP PPP + PPP G PP
Sbjct: 264 MHHEPGEHMPPPPMHHEPGE-------HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +1
Query: 259 APPGXXPXFXPXGXPP---PPXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAPXXPXPET 429
APP P P P PP P G PP P AP P P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 430 PPXXXKKXFXXPPXXAP 480
P K PP P
Sbjct: 1091 IPPVPKPSVAAPPVPKP 1107
Score = 30.7 bits (66), Expect = 0.32
Identities = 36/150 (24%), Positives = 40/150 (26%), Gaps = 10/150 (6%)
Frame = +1
Query: 187 PXSDFXKVXXPXKNXIXKXPXXGGAPPGXXPXFXPXGXPPP-----PXPXKLXGXXXXXP 351
P S+ + P + P G PP P P P P P P
Sbjct: 1069 PSSEIPSIPAP--SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 352 PXXXXP-PHXGGXPXXXX----APXXPXPETPPXXXKKXFXXPPXXAPPRGAXXXPPXXX 516
P P G P AP P P P K PP AP G PP
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG---IPPVPK 1183
Query: 517 KXXXXEKXGXFXKXXXXXPPXGGXXPPPPP 606
+ P G P PPP
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/92 (26%), Positives = 24/92 (26%), Gaps = 5/92 (5%)
Frame = +1
Query: 244 PXXGGAPPGXXPXFXPXGXPPP-----PXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAP 408
P GAPP P P P P P G PP P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV----PKPSVGVP 1208
Query: 409 XXPXPETPPXXXKKXFXXPPXXAPPRGAXXXP 504
P P T P PP P A P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 27.1 bits (57), Expect = 4.0
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 4/86 (4%)
Frame = +1
Query: 259 APPGXXPXFXPXGXPP----PPXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAPXXPXPE 426
APP P P P PP P G P PP P AP P P
Sbjct: 1149 APPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP----VPPPSEAPPVPKPS 1204
Query: 427 TPPXXXKKXFXXPPXXAPPRGAXXXP 504
PP P G P
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAGLPPVP 1230
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.32
Identities = 23/97 (23%), Positives = 26/97 (26%), Gaps = 7/97 (7%)
Frame = +2
Query: 245 PXGGGHPPXXXPXFXPRXXHRPPXPKNXXXXGXNXPPPXXXP-------PTXGXXPXXXG 403
P G PP P P +PP + PP P P G
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 404 PXGXXPLKPPPXXTKNXSXXPPXXXPPGGPXXXPXXP 514
P P PP + P P G P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +1
Query: 301 PPPPXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAPXXPXPETPPXXXKKXFXXPPXXAP 480
PPPP P PP P P PP PP P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 481 PRGAXXXPP 507
P PP
Sbjct: 421 PSLPPSAPP 429
Score = 27.9 bits (59), Expect = 2.3
Identities = 24/115 (20%), Positives = 27/115 (23%)
Frame = +1
Query: 262 PPGXXPXFXPXGXPPPPXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAPXXPXPETPPXX 441
PP P PP P PP A P PP
Sbjct: 258 PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPP 317
Query: 442 XKKXFXXPPXXAPPRGAXXXPPXXXKXXXXEKXGXFXKXXXXXPPXGGXXPPPPP 606
++ PP + PP PP G PPPPP
Sbjct: 318 SRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA-------GSIPLPPQGRSAPPPPP 365
Score = 25.8 bits (54), Expect = 9.2
Identities = 26/121 (21%), Positives = 30/121 (24%)
Frame = +2
Query: 290 PRXXHRPPXPKNXXXXGXNXPPPXXXPPTXGXXPXXXGPXGXXPLKPPPXXTKNXSXXPP 469
P RP P + + P PP+ P PPP +N PP
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK-PP 326
Query: 470 XXXPPGGPXXXPXXPKXXXXXKXGGXXXKXXXXXPXXGGXXPPPPXFXXXXXXPPPPFSX 649
P P P PPPP PPP S
Sbjct: 327 IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP-----PPPPRSAPSTGRQPPPLSS 381
Query: 650 S 652
S
Sbjct: 382 S 382
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.32
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +3
Query: 594 PPPPXFXXXXKXPPPLFPXXXXPPXXXXXFXPPPPKXXG*XXKKKNPPP 740
PPPP P P P PP PPPP G PPP
Sbjct: 732 PPPPPPAVIVPTPAPA-PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.9 bits (64), Expect = 0.56
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 594 PPPPXFXXXXKXPPPLFPXXXXPPXXXXXFXPPPPKXXG*XXKKKNPPPXXGXGGGXS 767
PPPP P P+ P P PPPP PPP G S
Sbjct: 734 PPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Score = 29.5 bits (63), Expect = 0.75
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 4/49 (8%)
Frame = +2
Query: 350 PPPXXXPPTXGXXPXXXGPX----GXXPLKPPPXXTKNXSXXPPXXXPP 484
PPP PT P P G P PPP PP PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +1
Query: 244 PXXGGAP-PGXXPXFXPXGXPPPPXPXKLXGXXXXXPPXXXXPPHXGGXPXXXXAP-XXP 417
P AP P P G PPPP P + G PP GG AP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Query: 418 XPE 426
P+
Sbjct: 802 EPK 804
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 572 PXXGGXXPPPPXFXXXXXXPPPP 640
P GG PPPP PPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 624 KXPPPLFPXXXXP-PXXXXXFXPPPPKXXG*XXKKKNPPPXXGXGGGXSPP 773
K PPP P P P PPP G PPP G G PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMG---GPPPPPPPPGVAGAGPPP 777
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.75
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -3
Query: 431 GVSGXGXXGAXXXXGXPPXW-GGXXLXGGYXXXXPXSFXGXGGGGXPXGXKXGXXPGGAP 255
G +G G G G PP GG GG+ G GG P G + G PGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG--PGGFG 241
Query: 254 PXXGXF 237
G F
Sbjct: 242 GGPGGF 247
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 0.98
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 630 PPPLFPXXXXPPXXXXXFXPPPPKXXG*XXKKKNPPP 740
PP P PP PPPP G K+KN P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 29.1 bits (62), Expect = 0.98
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 244 PXXGGAPPGXXPXFXPXGXPPPPXP 318
P PP P F P PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 570 PPXRGGXXPPPPXFXXXXKXPPP 638
PP PPPP F + PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.2 bits (55), Expect = 6.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 593 PPPPXFXXXXXXPPPP 640
PPPP F PPPP
Sbjct: 13 PPPPGFEPPSQPPPPP 28
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 4/77 (5%)
Frame = +1
Query: 289 PXGXPPPPXPXKLXGXXXXXPPXXXXPP--HXGGXPXXXXAPXXPXPETPPXXXKKXFXX 462
P P PP P PP PP P AP P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 463 PPXXAP--PRGAXXXPP 507
PP AP P PP
Sbjct: 184 PP-SAPSLPSAVPPMPP 199
Score = 25.8 bits (54), Expect = 9.2
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +2
Query: 308 PPXPKNXXXXGXNXPP-PXXXPPTXGXXPXXXGPXGXXPLK-PPPXXTKNXSXXPPXXXP 481
PP P++ + PP P PP+ P P PPP PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP--SA 187
Query: 482 PGGPXXXPXXP 514
P P P P
Sbjct: 188 PSLPSAVPPMP 198
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 311 PXPKNXXXXGXNXPPPXXXPPTXGXXPXXXGPXGXXPLKPP 433
P P G N PP P G P P G P + P
Sbjct: 14 PAPPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGGYPAQQP 54
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/80 (25%), Positives = 20/80 (25%)
Frame = +2
Query: 254 GGHPPXXXPXFXPRXXHRPPXPKNXXXXGXNXPPPXXXPPTXGXXPXXXGPXGXXPLKPP 433
G P F P PP P N P PP P P P P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPA 547
Query: 434 PXXTKNXSXXPPXXXPPGGP 493
P PPG P
Sbjct: 548 ------MPGIPGATAPPGAP 561
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 9.2
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 633 PPLFPXXXXPPXXXXXFXPPPPKXXG*XXKKKNPPPXXGXGGGXSPPXGGXXXXPXSXGP 812
PP+ P PP PPPP PPP PP P S P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSV--------PPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,670,513
Number of Sequences: 5004
Number of extensions: 44296
Number of successful extensions: 184
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 497299314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -