Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G20
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 29 0.79
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 29 1.0
SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit |Sch... 28 1.4
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 28 1.4
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 3.2
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 26 5.6
SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces... 25 9.8
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 25 9.8
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 25 9.8
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 29.1 bits (62), Expect = 0.79
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 539 PQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPL 381
P+ S+++ S++ L SS P +AT LYP APT P S + PL
Sbjct: 219 PRESTEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPT--PPASSSSSPL 269
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = -3
Query: 590 CRCATTR*SPARWPRSTPQR-------SSDRSASSIAPLGSSVLKLPM-NATPMDLELYP 435
CR ATT P T Q S+ R A++ + + ++P N P D +
Sbjct: 532 CRLATTHVEPTEVTAFTTQSVLASSAPSAGRPAAAQISRPAQLFRIPSTNPPPFDGD--- 588
Query: 434 *VCAPTCSQPEPSY 393
VC P C+ P P+Y
Sbjct: 589 -VCPPACNTPPPNY 601
>SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 311
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -2
Query: 702 YAVIMLRVLDGVHVLQPLRPASYLV-VELPAGALRGN 595
YAV +L +LD +HV+ + ASY++ ++ G+++G+
Sbjct: 86 YAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGD 122
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 492 LVRVEVADECDSDGPRVVPVGVRADVQPAGALVHLAVTSHQEXRVRCPSIARP 334
L+ + D D DGP+V+PV RA PA ++TS + V P++ P
Sbjct: 36 LIEEDDEDTEDDDGPQVLPVH-RAP-SPAAFRKRGSITSMDQYLVNMPAVPSP 86
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 27.1 bits (57), Expect = 3.2
Identities = 27/115 (23%), Positives = 48/115 (41%)
Frame = -3
Query: 608 LSEAMSCRCATTR*SPARWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*V 429
+S+A S +++R S + S+P RS+ R +S + S V+ P + P+ + P
Sbjct: 310 ISKAPSYPYSSSRPSASASLASSPTRSAFRPKTS-ETVSSEVVSSPPTS-PLHSPVKPVS 367
Query: 428 CAPTCSQPEPSYTLPLPPTRXRGSDVPVLQGLHVVGLDIPHQLLAASVRPAEGCD 264
E ++P+P + S PVL G + + + RP D
Sbjct: 368 NEQVEQVTEVELSIPVPSIQEAESQKPVLTGSSMRRPSVTSPTFEVAARPLTSMD 422
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 26.2 bits (55), Expect = 5.6
Identities = 27/133 (20%), Positives = 50/133 (37%)
Frame = -2
Query: 702 YAVIMLRVLDGVHVLQPLRPASYLVVELPAGALRGNELSVRHDAVVPREVAALHAAAQQR 523
Y ++L + DG + + +Y +L + ++R+ + + +H +
Sbjct: 205 YYYLVLELADGGELFHQIVRLTYFSEDLSRHVITQVAHAIRY---LHEDCGVVHRDI--K 259
Query: 522 PQRLQHRAARLVRVEVADECDSDGPRVVPVGVRADVQPAGALVHLAVTSHQEXRVRCPSI 343
P+ L + V V D P V G AG + + + +V S
Sbjct: 260 PENLLFDSIDFVPSRVRKYRAGDDPDKVDEGEFIPGVGAGTIGRIRLADFGLSKVVWDSH 319
Query: 342 ARPPCGWSGYSAP 304
+ PCG GY+AP
Sbjct: 320 TQTPCGTMGYTAP 332
>SPAC9.12c |atp12||F1-ATPase chaperone Atp12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 287
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +1
Query: 532 RCGVERGHLAGDYRVVAHRQLIASESPGRKLYNQIRRW 645
+ GV+ +L GD ++AH+Q + R + + W
Sbjct: 168 KLGVQLSYLDGDAGIIAHKQTQETHERIRNWLSSLNSW 205
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 386 PLPPTRXRGSDVPVLQGLHVVGLDIPHQLLAASVRPAEG 270
PLP T S+V + G++ + + H LL SV G
Sbjct: 113 PLPSTNASHSEVSLSAGVNDLNSNSEHDLLPKSVNKTPG 151
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 310 GISRPTTWRPCNTGTSDPRFLVGGNGKVY 396
G SR T +RP + P F +GG +Y
Sbjct: 11 GPSRGTRFRPLSFDVPKPLFKIGGREMIY 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,982,147
Number of Sequences: 5004
Number of extensions: 60393
Number of successful extensions: 180
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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