Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G17
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471    104   1e-22
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528    102   3e-22
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...   100   1e-21
09_02_0543 + 10427321-10428315,10428440-10429154                       30   2.9  
12_01_0442 + 3495333-3496484                                           25   7.8  

>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score =  104 bits (249), Expect = 1e-22
 Identities = 47/69 (68%), Positives = 60/69 (86%)
 Frame = +3

Query: 90  MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 269
           MP++I +IKDFL+ ARRKDA+SV+IK++ + VKFKVRCSR+LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRSKDAVKFKVRCSRYLYTLCVHDTDKANKLKQSL 60

Query: 270 PPGLQVKEV 296
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score =  102 bits (245), Expect = 3e-22
 Identities = 46/69 (66%), Positives = 59/69 (85%)
 Frame = +3

Query: 90  MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 269
           MP++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSL
Sbjct: 1   MPKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSL 60

Query: 270 PPGLQVKEV 296
           PPGL V+EV
Sbjct: 61  PPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score =  100 bits (240), Expect = 1e-21
 Identities = 45/68 (66%), Positives = 58/68 (85%)
 Frame = +3

Query: 93  PREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLP 272
           P++I +IKDFL+ ARRKDA+SV+IK+  + VKFKVRCS++LYTL + D +KA KLKQSLP
Sbjct: 32  PKQIHEIKDFLLTARRKDARSVRIKRTKDAVKFKVRCSKYLYTLCVFDADKANKLKQSLP 91

Query: 273 PGLQVKEV 296
           PGL V+EV
Sbjct: 92  PGLTVQEV 99


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/66 (25%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
 Frame = -3

Query: 836 PPXXXEXPKXPPXGGEXXXXPXPKXPGXXGXXGXGXXXR-GPKTKXPFPXGWXXXLXXXK 660
           PP   + P  PP          P  P      G G      P +  P    W        
Sbjct: 37  PPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAAAPSPHSPSPSNAPWVAPAADIP 96

Query: 659 PPXPPP 642
           PP PPP
Sbjct: 97  PPPPPP 102


>12_01_0442 + 3495333-3496484
          Length = 383

 Score = 24.6 bits (51), Expect(2) = 7.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 686 WXXXLXXXKPPXPPPXP 636
           W   L   +PP PPP P
Sbjct: 61  WAFRLPVFRPPPPPPPP 77



 Score = 22.2 bits (45), Expect(2) = 7.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 659 PPXPPPXPGK 630
           PP PPP P K
Sbjct: 71  PPPPPPPPAK 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,470,735
Number of Sequences: 37544
Number of extensions: 338358
Number of successful extensions: 845
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)