Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G16
(884 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 357 2e-99
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 40 4e-04
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 38 0.003
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 35 0.013
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 33 0.054
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 33 0.054
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 32 0.094
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 32 0.12
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 32 0.12
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 31 0.17
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 31 0.29
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 31 0.29
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.29
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 30 0.50
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 30 0.50
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 29 0.67
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 1.2
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 1.5
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 28 1.5
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 28 2.0
SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr 3||... 27 3.6
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 3.6
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 4.7
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 27 4.7
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 26 6.2
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 26 6.2
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 26 6.2
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 6.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.2
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 26 8.2
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 26 8.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 8.2
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 357 bits (877), Expect = 2e-99
Identities = 162/244 (66%), Positives = 195/244 (79%), Gaps = 3/244 (1%)
Frame = +1
Query: 148 TDKLTRIAIVNADRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGCGIC 327
++ LTRIAIV+ D+C+PK+CRQEC++SCPVVR GKLCIEV P D+IA ISE LCIGCGIC
Sbjct: 2 SESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGIC 61
Query: 328 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALK 507
VKKCPF AI IIN+P+NLE THRYS NSFKLHRLP PRPG+VLGLVG NGIGKSTALK
Sbjct: 62 VKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTALK 121
Query: 508 ILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVK 687
IL+GK KPNLGRY +PPDW E++ +FRGSELQN+FTK++ED++KALIKPQYVD IP+A+K
Sbjct: 122 ILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDNIKALIKPQYVDHIPRAIK 181
Query: 688 ---GTVGQLLDKKDEMKNQSVICRMLDLSHIRDREIAALSGGELQRFACAMVCIQNGDIF 858
TV L+ + N + DL ++ +RE+ LSGGELQRFA A V Q D++
Sbjct: 182 TGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADVY 241
Query: 859 MFDE 870
MFDE
Sbjct: 242 MFDE 245
Score = 52.4 bits (120), Expect = 8e-08
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +1
Query: 631 DLKALIKPQYVDQIPKAVKGTVGQLLDKKDEM-----KNQSVICRMLDLSHIRDREIAAL 795
DLK +KPQ + PK +GTV L KK K QS +C+ L + +I D+E+ L
Sbjct: 400 DLKISMKPQTI--APK-FQGTVRMLFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNL 456
Query: 796 SGGELQRFACAMVCIQNGDIFMFDE 870
SGGELQR A + D+++ DE
Sbjct: 457 SGGELQRVAICLALGMPADVYLIDE 481
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 40.3 bits (90), Expect = 4e-04
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 2/156 (1%)
Frame = +1
Query: 409 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAH 582
+N F L + + P GE++ ++G +G GKST + +L P G Y D +EI H
Sbjct: 447 ENLFSLINVSVFIPFGELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEH 506
Query: 583 FRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDL 762
GS + + + D+ I+ + + A + ++ + D
Sbjct: 507 VLGSTITLVCQQPVIFDM--TIRENIIMRNENASESDFEEVC----RLALVDEFALTFDQ 560
Query: 763 SHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDE 870
S+ + A+LSGG+ QR A A +++ +I + DE
Sbjct: 561 SYDTPCKEASLSGGQQQRIALARALLRDTEILILDE 596
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 37.5 bits (83), Expect = 0.003
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Frame = +1
Query: 439 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI-LAHFRGS-ELQNY 609
+ +PG+V+ LVG++G GKST ++IL N G T D D + + L+ R S +
Sbjct: 606 VAQPGKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRSSIGVVPQ 665
Query: 610 FTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDLSHIRDREIA 789
+ + D + IK Y P A + K ++ ++ + S + +R +
Sbjct: 666 DSTLFNDTILYNIK--YAK--PSATNEEI-YAAAKAAQIHDRILQFPDGYNSRVGERGL- 719
Query: 790 ALSGGELQRFACAMVCIQNGDIFMFDE 870
LSGGE QR A A +++ I + DE
Sbjct: 720 KLSGGEKQRVAVARAILKDPSIILLDE 746
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 433 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 540
L +P+ L LVG NG GKST LK+L+GK G
Sbjct: 25 LDLPKGSRTL-LVGANGAGKSTLLKLLSGKSLAKAG 59
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 33.1 bits (72), Expect = 0.054
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 1/156 (0%)
Frame = +1
Query: 406 SKNSFKLHRLPIPRPGEVLGLV-GQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAH 582
S F L L I P L +V G G GKS+ + L G+ N G Y P + +++
Sbjct: 625 SPGDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPR--SKGVSY 682
Query: 583 FRGSELQNYFTKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDL 762
S++ + D++ L Y+++ K V G L D QS + DL
Sbjct: 683 V--SQVPWLRNATIRDNI--LFDYPYIEERYKKVIQACGLLTDL------QSFVAS--DL 730
Query: 763 SHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDE 870
+ I ++ + LSGG+ QR A A I + D+
Sbjct: 731 TEIGEKGV-TLSGGQKQRIALARAVYSPTSIVLMDD 765
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 33.1 bits (72), Expect = 0.054
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILAGKQKPNLG 540
+ ++G NG GKST +K+L G+ P +G
Sbjct: 703 IAVIGPNGAGKSTLIKVLTGELLPTVG 729
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 32.3 bits (70), Expect = 0.094
Identities = 37/140 (26%), Positives = 56/140 (40%)
Frame = +1
Query: 451 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILED 630
G G+VG NG GKST L+ + + N P E+ F LQ ED
Sbjct: 470 GHRYGVVGHNGCGKSTLLRAIGDYKVENF------PSPDEVKTCFVAHSLQG------ED 517
Query: 631 DLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDLSHIRDREIAALSGGEL 810
A++ +V Q KA+ + D + + M ++ +A+LSGG
Sbjct: 518 TSMAIL--DFVAQ-DKALLTMNVTRQEAADALHSVGFTAEM------QENPVASLSGGWK 568
Query: 811 QRFACAMVCIQNGDIFMFDE 870
+ A +Q DI + DE
Sbjct: 569 MKLELARAMLQKADILLLDE 588
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPD 561
+ ++G NG GKST +K+L G+ P G+ P+
Sbjct: 722 VAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPN 755
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 31.9 bits (69), Expect = 0.12
Identities = 40/144 (27%), Positives = 63/144 (43%)
Frame = +1
Query: 439 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTK 618
IPR L +VG G GKST L G+ G+ T P Q I + + L+N
Sbjct: 604 IPRNQFTL-VVGSTGSGKSTLAMALLGELHVISGKMTTPSISQRIAYVPQAAWLRN--GT 660
Query: 619 ILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDLSHIRDREIAALS 798
I + L +P ++ + +K LD N DL++I ++LS
Sbjct: 661 IRSNILFG--EPYDEERYFQIIKACC---LDSDLNSMNDG------DLTYIHSNG-SSLS 708
Query: 799 GGELQRFACAMVCIQNGDIFMFDE 870
GG+ QR + A N ++++FD+
Sbjct: 709 GGQKQRVSLARALYSNAEVYIFDD 732
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 31.9 bits (69), Expect = 0.12
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 10/150 (6%)
Frame = +1
Query: 451 GEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAHFRGSELQNYFTKILE 627
G++ LVG +G GKST + ++ P G+ + D D L + L+N + + +
Sbjct: 448 GKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKD----LRTLNVASLRNQISLVQQ 503
Query: 628 DDL--KALIKPQYVDQIPKAVKGTVG-QLLDKK--DEMKNQSVICRMLDLSHIRDREIA- 789
+ + + +P +KGT+ + L+++ D K + ++ L +
Sbjct: 504 EPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFIMTLPEQFSTNVGQ 563
Query: 790 ---ALSGGELQRFACAMVCIQNGDIFMFDE 870
+SGG+ QR A A I + I + DE
Sbjct: 564 RGFLMSGGQKQRIAIARAVISDPKILLLDE 593
Score = 27.9 bits (59), Expect = 2.0
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Frame = +1
Query: 445 RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKIL 624
+PG+ + VG +G GKST + ++ R+ D + ++ G +++Y +
Sbjct: 1145 KPGQFVAFVGSSGCGKSTTIGLIE--------RFYDCDNGAVLV---DGVNVRDY---NI 1190
Query: 625 EDDLKALIKPQYVDQIPKAVKGTVGQ--LLDKKDEMKNQSVI--CRMLDL---------- 762
D K + V Q P +GTV + +L ++ + +I C+ ++
Sbjct: 1191 NDYRKQI---ALVSQEPTLYQGTVRENIVLGASKDVSEEEMIEACKKANIHEFILGLPNG 1247
Query: 763 -SHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDE 870
+ + ++ ++LSGG+ QR A A I+N I + DE
Sbjct: 1248 YNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDE 1284
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 391 TTHRYSKNS-FKLHRLPIPRPGEVL--GLVGQNGIGKSTALKILAGKQKPNLGRYTDPP 558
T YSK + R + RPG L G+VG IGKST +IL K NLG + P
Sbjct: 22 TRRYYSKQKDISIVRQRLGRPGNHLKIGIVGMPNIGKSTLFQILT---KTNLGNPANYP 77
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 388 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKPNLGR 543
H + +Y ++ SF L+ + I P E +G+VG+ G GKST L +P G+
Sbjct: 1230 HYSAKYREDLSFALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGK 1283
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 787 AALSGGELQRFACAMVCIQNGDIFMFDE 870
A+LSGG+ R + A DI++ D+
Sbjct: 702 ASLSGGQKSRISLARAIYSQADIYLLDD 729
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 451 GEVLGLVGQNGIGKSTALKILAGKQ 525
G GL G+NGIGKST L+ L+ ++
Sbjct: 208 GRRYGLTGRNGIGKSTLLRALSRRE 232
Score = 29.9 bits (64), Expect = 0.50
Identities = 37/137 (27%), Positives = 60/137 (43%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILEDDLK 639
+G+VG NG GKST LK+L + P G + P + +A+F + L+ +L
Sbjct: 547 IGVVGPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLR--IAYFA-----QHHVDTLDLNLN 599
Query: 640 ALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVICRMLDLSHIRDREIAALSGGELQRF 819
AL + K G K E + + + + +++ LSGG+ R
Sbjct: 600 AL------SFLAKTFPG--------KGEEEYRRHLGAFGVSGPLALQKMITLSGGQKSRV 645
Query: 820 ACAMVCIQNGDIFMFDE 870
A A + +QN I + DE
Sbjct: 646 AFACLGLQNPHILILDE 662
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.7 bits (66), Expect = 0.29
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILAGKQKPNLG 540
+ LVG NG GK+T +K++ K +P+ G
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTG 649
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 29.9 bits (64), Expect = 0.50
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 448 PGEVLGLVGQNGIGKSTALKILA 516
PG++ L+G++G GK+T L +LA
Sbjct: 910 PGKLTALMGESGAGKTTLLNVLA 932
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 29.9 bits (64), Expect = 0.50
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 793 LSGGELQRFACAMVCIQNGDIFMFDE 870
+SGGE QR A + + ++N +I FDE
Sbjct: 580 ISGGEKQRLAVSRLLLKNPEILFFDE 605
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 29.5 bits (63), Expect = 0.67
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILAGKQKP---NLGRYT 549
+ +VG+NG GKST L ++ G P N+ RY+
Sbjct: 419 VAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYS 451
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 451 GEVLGLVGQNGIGKSTALKILAGK 522
G+ GL+G NG GKST L+ +A +
Sbjct: 101 GQRYGLLGDNGSGKSTFLESVAAR 124
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Frame = +1
Query: 454 EVLGLVGQNGIGKSTALKILAG--KQKP---NLGRYTDPPD----WQEILAHFRGSELQN 606
E L LVG+ G GK+T +++LAG QK N+ + T+ D ++ I A G L
Sbjct: 468 EPLLLVGETGTGKTTTIQLLAGLLGQKVTVINMSQQTESSDMLGGYKPINASTLGLPLHE 527
Query: 607 YFTKILEDDLKALIKPQYV 663
F I E + +++
Sbjct: 528 RFIDIFEQTFSSKKNAKFI 546
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 388 HTTHRYSKN-SFKLHRLPIP-RPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 540
H + RY +N L+ + + +P E +G+VG+ G GKST L +P G
Sbjct: 1228 HYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSG 1280
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 439 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLG 540
+ R GE+ +VG+ G+GKS+ L+ G + + G
Sbjct: 605 VARRGELCCIVGKVGMGKSSLLEACLGNMQKHSG 638
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/104 (21%), Positives = 43/104 (41%)
Frame = +1
Query: 433 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYF 612
LP P +LG + + + LA Q+P+ + D W E H + S ++
Sbjct: 616 LPKEIPIAILGSMRKKAFQLLRSGSELAHGQRPSHPKLKDFSSWGEFEVHVKNSAEEDAE 675
Query: 613 TKILEDDLKALIKPQYVDQIPKAVKGTVGQLLDKKDEMKNQSVI 744
++ D L ++ ++ K +L+D KD+ N ++
Sbjct: 676 LALVYDMADELFSESFLSRLDNCEK----RLMDSKDDGDNGIIL 715
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 295 SEELCIGCGICVKKCPFDAITI 360
+EEL +G G C+ PFD +T+
Sbjct: 239 NEELLMGYGFCLPDNPFDTVTL 260
>SPCC737.05 |||peroxin Pex28/29|Schizosaccharomyces pombe|chr
3|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 252 FSHTYNRTTLLTFLPTSLWLAAISIHNSDTS*LVGF 145
F Y R ++ +LP ++W+ IS+H S L+ F
Sbjct: 129 FLLAYLRISIDRYLPIAIWIGLISLHPKLRSYLIQF 164
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 3.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 809 CSVLHVPWCAFKMGIYLCL 865
CS V W ++ +GI+LCL
Sbjct: 26 CSTRGVQWASWNLGIFLCL 44
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 409 KNSFKLHRLPIPRP-GEVLGLVGQNGIGKSTALKILAGKQK 528
KN++ + P P G+ LG++G GIGK+ A + A K
Sbjct: 141 KNNWNANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMK 181
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 433 LPIPRPGEVLGLVGQNGIGKSTALKILAGKQK 528
LP + GLVG +GKS+ + L G +K
Sbjct: 295 LPDGKTKMTFGLVGYPNVGKSSTINALVGSKK 326
>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 437
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 166 YELACRFPRDLFVETFLLKVSEHLAKYCL-HSRVHRFRNVKRQ 41
Y++ + ++L E +LKV H+A++ L H+F+ + RQ
Sbjct: 133 YDVTTKALQNLNNERLMLKVLMHVARFLLTQKNYHKFKYLLRQ 175
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 445 RPGEVLGLVGQNGIGKSTALKILAG 519
R GE L G NG GK+T L + G
Sbjct: 288 REGERWALTGSNGSGKTTLLAYVVG 312
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 328 VKKCPFDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTAL 504
+ K D TI IP+N H H++ +S ++ ++ + R V G +G S A+
Sbjct: 269 IAKAKIDT-TIAVIPANAFHHLVHKFPNSSAQIVQVILTRFQRVTFSTGYEYLGLSDAI 326
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 341 PLMLSPSSISHLTWRNTLPTVTPKTHSSSI 430
PL L PSS+ R T +TPK ++S+I
Sbjct: 142 PLKLIPSSLCGRLLRTTEVLITPKPNTSAI 171
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.2
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 439 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPD 561
+P PG+ L+ Q G + K KP GR D D
Sbjct: 1743 VPNPGDRSALLQQIHTGTRLKKTVTTDKSKPIAGRVLDASD 1783
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 451 GEVLGLVGQNGIGKSTALKIL 513
G+ +G++G IGKS A KIL
Sbjct: 159 GKRVGIIGMGAIGKSFAQKIL 179
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 460 LGLVGQNGIGKSTALKILA 516
+ L+G NG+GKST L +A
Sbjct: 345 ISLIGVNGVGKSTTLAKIA 363
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 835 TPWHMQNAATLLPKVPQFHDHGCVID 758
T W MQNA+ LP++ F +H ++D
Sbjct: 2439 THWLMQNASVDLPEIKDF-EHVSILD 2463
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,748,006
Number of Sequences: 5004
Number of extensions: 81332
Number of successful extensions: 303
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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