Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G10
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626...    30   2.1  
02_03_0254 + 16910070-16910173,16910266-16910410                       29   3.7  
06_01_0478 + 3407882-3407999,3408119-3408278,3408377-3408448,340...    29   4.9  
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031...    28   8.6  
02_01_0111 - 825369-825428,825778-826380,826467-827267,827716-82...    28   8.6  

>12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653,
            24963146-24963943,24964140-24964422,24964500-24964951,
            24965744-24965870,24965950-24966074,24966188-24966858,
            24966976-24967093,24967177-24967293,24967564-24967658,
            24968152-24968303,24968858-24968913,24969001-24969218,
            24969842-24970239,24970345-24970628,24970730-24970836,
            24970882-24970968,24971729-24971990,24972228-24972503,
            24973197-24973254,24973437-24973756,24973889-24973999,
            24974183-24974350,24974494-24974622,24974731-24974820,
            24974934-24975040,24975133-24975281,24975584-24975666,
            24975749-24975844,24975957-24976079,24976180-24976263,
            24976371-24976511,24976652-24976951,24977386-24977453,
            24977540-24977642,24979363-24979524,24979613-24981230,
            24981270-24981661,24981689-24981991,24982078-24982161,
            24982296-24982448,24982678-24982841,24982915-24983062,
            24983209-24983331,24983409-24983496,24983686-24983867
          Length = 4177

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 392  SVISMRYAHTAIVAHVRNAANKSQEANFXGVTPRTQLSSADL 517
            SVI+ RY H ++  H  N   K + A+F  +  R +L  A L
Sbjct: 2478 SVITDRYRHISLAIHSVNLDEKWEGASFGSILRRNKLQDATL 2519


>02_03_0254 + 16910070-16910173,16910266-16910410
          Length = 82

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 525 SGWKILQSVRQRKERGCSNI--PDSGITRNWCRT 620
           +GW +  +VR    R C  +   DSGI   WCR+
Sbjct: 11  AGWCVDSNVRTDGGRSCDTVWTADSGIDGRWCRS 44


>06_01_0478 +
           3407882-3407999,3408119-3408278,3408377-3408448,
           3409599-3409670,3410471-3410539,3410654-3410659,
           3410951-3411022,3411103-3411174,3411881-3411935,
           3412139-3412366
          Length = 307

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 181 QNSNNVAKAAALNFIREHWSPVCGTCCHNYDP 276
           +NS N++ AAAL+ + E W    GT    Y P
Sbjct: 32  RNSTNISDAAALHTVFEKWGLEDGTMPQGYHP 63


>05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183,
            27403297-27403449,27403544-27403644,27403945-27404041,
            27404542-27404651,27404775-27404878,27405129-27405308,
            27405398-27405741,27405841-27405905,27405981-27406450,
            27406939-27407793,27408045-27408116,27408475-27408575,
            27409069-27409170,27409295-27409456,27409665-27411230,
            27411384-27411602,27413924-27414198,27414291-27414596,
            27414727-27415012,27415085-27415087,27415162-27415416,
            27415537-27415803
          Length = 2236

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 290  VSRSDDAETEATLDVDTVTEGPVQPI 367
            +S+ D+ ET  T D+   +EG VQP+
Sbjct: 2209 LSKDDEGETNGTEDIAVSSEGLVQPV 2234


>02_01_0111 -
           825369-825428,825778-826380,826467-827267,827716-827766
          Length = 504

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 196 VAKAAALNFIREHWSPVCGTCC 261
           V + A   +++ HW P CG  C
Sbjct: 225 VTRDAKARYVKFHWKPTCGVSC 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,874,391
Number of Sequences: 37544
Number of extensions: 481434
Number of successful extensions: 1171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)