Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G10
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29378-11|AAP40540.1|  125|Caenorhabditis elegans Adamts family ...    28   7.8  
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p...    28   7.8  
AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    28   7.8  
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p...    28   7.8  

>U29378-11|AAP40540.1|  125|Caenorhabditis elegans Adamts family
           protein 2, isoform b protein.
          Length = 125

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
 Frame = +1

Query: 307 CGN*SNARCRYSNGGTCSTNKTDEDGCEVRDIY----AIRSHGYCSACAKCCKQISRSQL 474
           CG     R R    G C  N  +   C  RD      A    GY S+C++ C    R ++
Sbjct: 36  CGAGVKRRTRTCRTGNCPGNYKESAICNDRDCENKNAAWGGWGYWSSCSETCGDGVRKRV 95

Query: 475 *XCY 486
             CY
Sbjct: 96  RKCY 99


>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
            protein 2, isoform a protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
 Frame = +1

Query: 307  CGN*SNARCRYSNGGTCSTNKTDEDGCEVRDIY----AIRSHGYCSACAKCCKQISRSQL 474
            CG     R R    G C  N  +   C  RD      A    GY S+C++ C    R ++
Sbjct: 931  CGAGVKRRTRTCRTGNCPGNYKESAICNDRDCENKNAAWGGWGYWSSCSETCGDGVRKRV 990

Query: 475  *XCY 486
              CY
Sbjct: 991  RKCY 994


>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 340 SNGGTCSTNKTDEDGCEVRDIYAIRSHGYCSAC 438
           +N   CS N  +  GC  R  Y   + GY S C
Sbjct: 60  NNNNGCSCNPCNGGGCAPRCSYCPNNFGYSSCC 92


>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
            protease protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
 Frame = +1

Query: 307  CGN*SNARCRYSNGGTCSTNKTDEDGCEVRDIY----AIRSHGYCSACAKCCKQISRSQL 474
            CG     R R    G C  N  +   C  RD      A    GY S+C++ C    R ++
Sbjct: 931  CGAGVKRRTRTCRTGNCPGNYKESAICNDRDCENKNAAWGGWGYWSSCSETCGDGVRKRV 990

Query: 475  *XCY 486
              CY
Sbjct: 991  RKCY 994


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,136
Number of Sequences: 27780
Number of extensions: 418113
Number of successful extensions: 1171
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)