Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G09
         (1088 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117...    32   0.69 
07_03_1098 + 23942933-23943025,23943051-23943749                       30   2.8  
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858...    30   3.7  
03_06_0421 - 33797836-33797992,33798450-33798549,33798646-337987...    29   4.9  

>01_06_0789 -
           32010131-32010330,32010438-32010866,32011658-32011752,
           32011836-32011933,32012586-32012942,32013615-32013792,
           32013856-32013936,32014441-32014548,32014916-32015178
          Length = 602

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -1

Query: 431 PRVVPVGVRADVQPAGAXVHLAV-TSHQVRGSDVPVLQGLHVVGLDIPHELLAASV 267
           PR VPVG     QP     HL V    Q+    +PV++  HVV + +P   +A +V
Sbjct: 14  PRAVPVGFP---QPQQLRAHLPVGVPQQLHPRGLPVMRSHHVVHVPLPRPAVAVAV 66


>07_03_1098 + 23942933-23943025,23943051-23943749
          Length = 263

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -1

Query: 293 PHELLAASVRPAEGCDCVLDDDRGSRAAPGTTRAPG 186
           PH+  AA+ +P   CD  L    GS  APG  R+ G
Sbjct: 194 PHDAAAAAPQPEPSCDLGLWLSPGSPPAPGDRRSGG 229


>07_03_0446 -
           18285132-18285221,18285437-18285499,18285805-18285867,
           18286079-18286129,18286413-18286506,18286696-18286856,
           18287089-18287145,18287380-18287493,18287934-18287999,
           18288063-18288266,18289207-18289284,18289669-18289788,
           18290425-18290491,18290635-18290735,18290820-18290936,
           18292024-18292107,18292181-18292309,18292385-18292510,
           18292622-18292696,18292814-18292947,18293032-18293137,
           18293220-18293276,18294387-18294573,18295244-18295407,
           18296129-18296353,18296538-18296744,18297043-18297375,
           18297604-18297993
          Length = 1220

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -3

Query: 312 CGWSGYSARAPRSQRPSCR 256
           CG+ GYS  AP++ RPSCR
Sbjct: 63  CGY-GYSTPAPKAPRPSCR 80


>03_06_0421 -
           33797836-33797992,33798450-33798549,33798646-33798700,
           33798965-33799085,33799759-33799856,33800004-33800105,
           33800196-33800360,33800441-33800522,33800960-33801117,
           33801214-33801339,33801533-33801616,33802011-33802100,
           33802188-33802258,33803420-33803513,33803585-33803671,
           33804258-33804306,33805450-33805538,33805691-33805756,
           33806009-33806071,33806174-33806282,33806376-33806446,
           33807212-33807298,33807390-33807535,33808848-33808953,
           33809429-33809494,33809672-33809741,33810839-33811206
          Length = 959

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 228 SRLTGRARYDTCTGIKPSHCFLLXTSQSAGISVRSELRXRARV 100
           S L GRA  D   G+KP H  +L      G++ R   R  ARV
Sbjct: 101 SVLLGRALPDVRDGLKPVHRRILYAMHEMGLASRRPFRKCARV 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,366,377
Number of Sequences: 37544
Number of extensions: 432377
Number of successful extensions: 1424
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1424
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3257937684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)