Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G07
         (918 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR407612-1|CAG28540.1|  286|Homo sapiens GBAS protein.                 39   0.022
BT007112-1|AAP35776.1|  286|Homo sapiens glioblastoma amplified ...    39   0.022
BC030821-1|AAH30821.1|  286|Homo sapiens glioblastoma amplified ...    39   0.022
BC001837-1|AAH01837.1|  286|Homo sapiens GBAS protein protein.         39   0.022
BC000732-1|AAH00732.1|  286|Homo sapiens GBAS protein protein.         39   0.022
AJ001259-1|CAA04633.1|  285|Homo sapiens NIPSNAP2 protein protein.     39   0.022
AF029786-1|AAC29002.1|  286|Homo sapiens GBAS protein.                 39   0.022
BC006473-1|AAH06473.1|  284|Homo sapiens nipsnap homolog 1 (C. e...    35   0.36 
BC002371-1|AAH02371.1|  284|Homo sapiens nipsnap homolog 1 (C. e...    35   0.36 
AJ001258-1|CAA04632.1|  284|Homo sapiens NIPSNAP1 protein protein.     35   0.36 

>CR407612-1|CAG28540.1|  286|Homo sapiens GBAS protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>BT007112-1|AAP35776.1|  286|Homo sapiens glioblastoma amplified
           sequence protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>BC030821-1|AAH30821.1|  286|Homo sapiens glioblastoma amplified
           sequence protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>BC001837-1|AAH01837.1|  286|Homo sapiens GBAS protein protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>BC000732-1|AAH00732.1|  286|Homo sapiens GBAS protein protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>AJ001259-1|CAA04633.1|  285|Homo sapiens NIPSNAP2 protein protein.
          Length = 285

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 25  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 68


>AF029786-1|AAC29002.1|  286|Homo sapiens GBAS protein.
          Length = 286

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 16/45 (35%), Positives = 30/45 (66%)
 Frame = +3

Query: 144 LVPKNARVISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           L+P+  R  ++S+  + +D W   L VR+++P K++HS +L+ KE
Sbjct: 26  LLPR-LRTWTSSSNRSREDSWLKSLFVRKVDPRKDAHSNLLAKKE 69


>BC006473-1|AAH06473.1|  284|Homo sapiens nipsnap homolog 1 (C.
           elegans) protein.
          Length = 284

 Score = 35.1 bits (77), Expect = 0.36
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 189 NTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           + +  WF  L V +++P K++HS +LS KE
Sbjct: 38  DNEGSWFRSLFVHKVDPRKDAHSTLLSKKE 67


>BC002371-1|AAH02371.1|  284|Homo sapiens nipsnap homolog 1 (C.
           elegans) protein.
          Length = 284

 Score = 35.1 bits (77), Expect = 0.36
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 189 NTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           + +  WF  L V +++P K++HS +LS KE
Sbjct: 38  DNEGSWFRSLFVHKVDPRKDAHSTLLSKKE 67


>AJ001258-1|CAA04632.1|  284|Homo sapiens NIPSNAP1 protein protein.
          Length = 284

 Score = 35.1 bits (77), Expect = 0.36
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 189 NTDDGWFSKLLVRRIEPTKESHSRMLSDKE 278
           + +  WF  L V +++P K++HS +LS KE
Sbjct: 38  DNEGSWFRSLFVHKVDPRKDAHSTLLSKKE 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,779,320
Number of Sequences: 237096
Number of extensions: 584362
Number of successful extensions: 994
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)