Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G06
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 47 2e-05
11_01_0767 + 6438648-6438809,6439146-6440000 44 1e-04
05_06_0044 - 25150322-25151260 40 0.004
11_01_0750 - 6315126-6315896,6316371-6316784 39 0.006
11_02_0011 - 7337618-7338496,7338596-7338991 31 0.068
11_02_0012 - 7346282-7347136,7347234-7347593 32 0.54
09_04_0426 - 17451731-17451886,17451974-17452079,17452289-174523... 30 2.2
01_06_0824 - 32243495-32244319,32244449-32244859 30 2.2
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 30 2.9
01_01_1013 - 8015552-8015613,8016898-8018035 29 3.8
11_01_0771 + 6453130-6454488 28 8.7
01_01_1152 + 9170628-9171899 28 8.7
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 807
+G W F+AS+T++ +FH+ + ++ P M + + + L K+++LPY++ G
Sbjct: 253 KGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGGDK 310
Query: 808 --FRMVVVLPDKIDGLPAVXEK 867
F M ++LP+ DGL ++ EK
Sbjct: 311 RQFSMYILLPEAQDGLWSLAEK 332
Score = 46.4 bits (105), Expect = 3e-05
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 807
+G W F+ S+TE+ +FH+ + ++ P M + + + + L K+++LPY + G
Sbjct: 505 KGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKKQYLSSYDSL--KVLKLPYLQGGDK 562
Query: 808 --FRMVVVLPDKIDGLPAVXEK 867
F M ++LP+ DGL ++ EK
Sbjct: 563 RQFSMYILLPEAQDGLWSLAEK 584
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 44.4 bits (100), Expect = 1e-04
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKE---- 801
+G W PF+ S+T E++F + + ++ P M+ ++ G +++ LPYK
Sbjct: 98 KGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYKATSDT 157
Query: 802 ---------PGFRMVVVLPDKIDGLPAVXEK 867
P F M+V LPD DGLP + ++
Sbjct: 158 YNLKLRYSLPSFAMLVFLPDDRDGLPGLLDR 188
>05_06_0044 - 25150322-25151260
Length = 312
Score = 39.5 bits (88), Expect = 0.004
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 640 HWHVPFNASETEEKDFHVDEKTIIKKPTMR-LLQSLFYTENEELGAKMIELPYKEPG--- 807
+W PF TEE DFHV ++ P M Q F G ++ + Y+ G
Sbjct: 89 YWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMYRTGGAAG 148
Query: 808 ----FRMVVVLPDKIDGLPAVXEKAA 873
F M + LPD DGLP + K A
Sbjct: 149 GDKMFAMYIYLPDDRDGLPELARKLA 174
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +3
Query: 354 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADXI 527
+L R P+ L A ++ L+ F A N++ S +F + P++A D I
Sbjct: 88 VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146
Query: 528 NRWADEQTQGHIKTPVSEDKIDPATAVAMXNVIFFQ 635
N W + T+G + T + ID T + + + ++F+
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTGLVLGSALYFR 182
Score = 35.9 bits (79), Expect = 0.043
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYK----E 801
RG W + T E+ F+ + T ++ P + ++ + ++ K+I+LPYK E
Sbjct: 182 RGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHDNF--KVIKLPYKQGKNE 239
Query: 802 PGFRMVVVLPDKIDGLPAVXEK 867
F M + LPD DGL + +K
Sbjct: 240 RKFSMYIFLPDDHDGLFELTQK 261
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
Frame = +3
Query: 270 SGAGAQSKEEIREILGGG---EAQESTHT---YGLLNQRYAEFDPKFLTVANKIYVSDQY 431
+GA + +E+ +LG + +ES GL ++ A P+ ++ A ++ +
Sbjct: 49 AGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADES-ASGGPR-VSDACGVWHDETL 106
Query: 432 KLADAF-SRTANLFRSEVDNINFSA-PKNAADXINRWADEQTQGHIKTPVSEDKIDPATA 605
+L A+ + A +++ NF PK + IN+W + T I + + + TA
Sbjct: 107 ELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTA 166
Query: 606 VAMXNVIFFQ 635
+ + N I+F+
Sbjct: 167 LVLVNAIYFK 176
Score = 29.5 bits (63), Expect(2) = 0.068
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 805 GFRMVVVLPDKIDGLPAVXEKAA 873
G M + LPD+ DGLPA+ +K A
Sbjct: 261 GLSMYIFLPDERDGLPALVDKMA 283
Score = 24.6 bits (51), Expect(2) = 0.068
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPY 795
+G W PF S T FH + + + P M + + ++ G +++LPY
Sbjct: 176 KGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHD--GFTVLKLPY 227
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 32.3 bits (70), Expect = 0.54
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 652 PFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKEPGFRMVVVLP 831
PF +S ++ D ++K P R +++ + + ++ +++ + G M + LP
Sbjct: 192 PFMSSREDQYIGFYDGFKVLKLPYHRTMKN--HGDGGDITPAILKHYGENVGLSMYIFLP 249
Query: 832 DKIDGLPAVXEKAA 873
D DGLPA+ +K A
Sbjct: 250 DARDGLPALVDKMA 263
Score = 31.5 bits (68), Expect = 0.94
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 504 PKNAADXINRWADEQTQGHIKTPVSEDKIDPATAVAMXNVIFFQ 635
PK++ IN+W + T I+ + + + TA+ + N I+F+
Sbjct: 121 PKSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFK 164
>09_04_0426 -
17451731-17451886,17451974-17452079,17452289-17452387,
17452782-17452888,17452985-17453230,17454187-17454461,
17454834-17454886,17455163-17455455
Length = 444
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 104 RRRSTCSVMNSQGQDSAMPSTRPPCKILKESYNLADDKNVIAS 232
RR ST +V S G + P R + LKE Y+++D N+ A+
Sbjct: 37 RRSSTVTVSGSNGYSAHEPGARVSSR-LKEEYSVSDQSNLKAA 78
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG-- 807
+G W F+A T + F++ + + P M + + G K++ LPY G
Sbjct: 181 KGDWESKFDARSTSDDVFYLPDGGHVSAPFMSSGKWQYIACRA--GYKVLRLPYARGGRG 238
Query: 808 --------FRMVVVLPDKIDGLPAVXEK 867
F M + LPD+ GLP + K
Sbjct: 239 RGRDTGRLFSMYIYLPDERHGLPDMLRK 266
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 336 TLEPPLPQGFPLSLPWTVHRLQTRXK 259
+L PPLP G PLS P+ QT K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776
>01_01_1013 - 8015552-8015613,8016898-8018035
Length = 399
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 182 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 355
I K +++AD ++ S +L+ S+ +W+ V + PWG G V+ T +
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212
Query: 356 IKSALRRIRPEILDCRQ*NIRFRPV 430
+ + + +I RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236
>11_01_0771 + 6453130-6454488
Length = 452
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 507 KNAADXINRWADEQTQGHIKTPVSEDKIDPATAVAMXNVIFFQ 635
+ A IN WA T I + + P TAV + N I+F+
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFK 213
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFH 690
+G W PFN S+TE K F+
Sbjct: 213 KGKWDRPFNESDTERKPFY 231
>01_01_1152 + 9170628-9171899
Length = 423
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 634 RGHWHVPFNASETEEKDFHVDEKTIIKKPTMRLLQSLFYTENEELGAKMIELPYKEPG 807
+G W +PF+ S T FH+ + ++ P M G ++LPYK G
Sbjct: 199 KGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKNVG 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,280,569
Number of Sequences: 37544
Number of extensions: 518202
Number of successful extensions: 1303
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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