Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G05
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 35 0.018
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 31 0.22
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.68
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 29 0.90
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 28 2.1
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 26 6.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 6.3
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 6.3
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 8.4
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 26 8.4
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 8.4
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 34.7 bits (76), Expect = 0.018
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 494 VTPKTKPARKSPGSXPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSST--VIAPLT 667
VTP P S S PP +T T S P +++ S T + T +ST V +
Sbjct: 301 VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVP 360
Query: 668 PSNTTGTLSPP 700
P++T+ T +PP
Sbjct: 361 PTSTSSTSTPP 371
Score = 33.5 bits (73), Expect = 0.042
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 500 PKTKPARKSPGSXP-PCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPS- 673
P T + S P P T+ TS S PP NST + +T V + SST P S
Sbjct: 264 PPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNST-TPVTPTVPPTSTSSTSTPPPPAST 322
Query: 674 NTTGTLSPPM 703
++TGT S P+
Sbjct: 323 SSTGTSSSPL 332
Score = 31.1 bits (67), Expect = 0.22
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +2
Query: 494 VTPKTKPARKSPGSXPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPS 673
VTP P S S PP +T T S P +++ S T + T +ST P+TP+
Sbjct: 355 VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNST--TPVTPT 412
Query: 674 NTTGTLSPPM 703
+ S P+
Sbjct: 413 VPPTSSSTPL 422
Score = 29.5 bits (63), Expect = 0.68
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 485 LHSVTPKTKPARKSPGSXPPCW-KTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 661
L++ TP T P S S W TT T S T+ST +T T ++ +
Sbjct: 598 LYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSI 657
Query: 662 LTPSNTTGTLSPPMYXSDVMFF 727
T S++T T S F+
Sbjct: 658 STSSSSTATSSTSFASESSSFY 679
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.1 bits (67), Expect = 0.22
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +2
Query: 488 HSVTPKTKPARKSPGSXPPCWKTTEF--TSRSCPPRT--NST*SSITRKVLVMTVSSTVI 655
H+ T T P S + TT T+ + PP T NST + + V T +TV+
Sbjct: 77 HNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNT--TTVV 134
Query: 656 APLTPSNTTGTLSPPMYXSDVMFFVYNRXYNSV 754
P T NTT T+ PP ++ FV +S+
Sbjct: 135 PPTTHVNTT-TVVPPTTHANTTSFVPTTTESSI 166
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 554 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 700
+T TS PP T+ ++ T ++T + P T NTT T +PP
Sbjct: 63 STNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPP 111
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 539 PPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 700
PP + T+ + PP T+ ++ + ++T P T N+T T+ PP
Sbjct: 71 PPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPP 124
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 494 VTPKTKPARKSPGSXPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPS 673
V P + + + PP T+ T+ + PP T+ ++ T S+T + P T
Sbjct: 70 VPPPSTSHNSTTTTVPPT--TSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127
Query: 674 NTTGTLSPP 700
T T+ PP
Sbjct: 128 VNTTTVVPP 136
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.5 bits (63), Expect = 0.68
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 576 DLEVNSVVFQHGGXLPGDFLAGFVFGVTECNFVV 475
DLE N +V Q+ G G+FL G FG + FV+
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVL 444
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 29.1 bits (62), Expect = 0.90
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 220 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 363
ET K S K +K + + +++++ K NT++ A Q W+K KE
Sbjct: 128 ETPKKKHSLIRKRRKSPLDSSSAQKVLKKNKLNTLEQAQQNWSKYIKE 175
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 187 QLYMSVVIGEY-ETAIAKCSEYLKEKKGEVIKEAVKRLIE 303
Q+++++V+ Y A+ EYL+EK I + K ++E
Sbjct: 556 QIFINIVLPNYIRAALVVAKEYLREKANADINDLTKDMLE 595
>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3
Query: 678 VFEGVSGAITVDDTVIT 628
V G+ GAIT+DD++IT
Sbjct: 117 VAAGIEGAITLDDSIIT 133
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 551 KTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTLSPP 700
+TTE T+ P T ++ S T ++ T T I P+ P N + ++S P
Sbjct: 853 ETTEGTATYTEPTTFTSTFSFTTTIIGGT---TTIIPVNPGNPSSSVSAP 899
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/76 (21%), Positives = 33/76 (43%)
Frame = -1
Query: 323 MVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVAL 144
M F ++ T + +PF R+ HL S +T+ +Y+ + T ++++
Sbjct: 1 MRFFETLALALLTTGALAAPF---RHPHHLLNKRDVSVVTSKVYAYTTVTLEAAASAIST 57
Query: 143 EASAHTARTKANKVKS 96
+A A T A ++
Sbjct: 58 NGAAKEAATAAGDAET 73
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 424 LINKRDHHALKLIDQQNHNKIAFGDSKDKTS 516
L+ K+D A K+ DQ H K+ +DK S
Sbjct: 496 LLTKKDSIANKISDQSEHLKVLEDVQRDKVS 526
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 25.8 bits (54), Expect = 8.4
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Frame = +1
Query: 367 VKSYFPIQFRVIFTEQTVKLINKRDHHALKL----IDQQNH-NKIAFGDSKDKTSKKVSW 531
+K Y P + + VK IN+ D LKL + N + I+FG KD SK +S
Sbjct: 139 IKKYSPTSLEL----EQVKEINRLDGLLLKLQLGDVPSVNWLDDISFGKIKDFRSKHMSL 194
Query: 532 KXTPVLENNRVYFKIMSTEDKQYL-KLDN-TKGSSDDRIIYGDSTADTFKH 678
P+L + + F + Y K +N SS D + DS A+ KH
Sbjct: 195 VTIPILYLDFLQFSFPVVFQRSYYPKSENRVYYSSFDLELNLDSPAE-LKH 244
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 653 IAPLTPSNTTGTLSPPMYXSDVMFFVYNRXYNSVMTL 763
+ PL PS+ +G LSPP + + N YN+ L
Sbjct: 146 VHPLRPSHVSGPLSPPEPKAASVDHSINPAYNASFRL 182
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,376,556
Number of Sequences: 5004
Number of extensions: 67231
Number of successful extensions: 266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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