Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G04
         (923 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U23523-2|AAC46559.2|  399|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>U41033-6|AAA82378.1|  859|Caenorhabditis elegans Hypothetical
           protein K09E3.7 protein.
          Length = 859

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 25/95 (26%), Positives = 43/95 (45%)
 Frame = +1

Query: 481 NTVIHRIRGITQERTCXQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQD 660
           N+ +  +R + Q+RT      K+    +      +  G+  LTS   I  Q RG  +  +
Sbjct: 590 NSRVSSLRAMEQQRTVSASTLKQEAVFEMVNGLSYQRGN--LTSNGPIPTQFRG--SNME 645

Query: 661 YKDTRRFPLGSSPRALSCFRPXPALPDTCPPFLPS 765
            K +R FP+ +   A+    P  + P T P F+P+
Sbjct: 646 AKQSR-FPVWNQHPAMPLSLPTQSTPPTIPAFIPT 679


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 638 EVAKPD-RTIKIPGVSPLEAPLVRSPVSDPCPLYRIPVR 751
           E+ +P+  T K+P +   E      PVSDP P  ++PV+
Sbjct: 225 EIKEPEPATRKVPALKKKEPSTSVKPVSDPSPTKKVPVK 263


>U23523-2|AAC46559.2|  399|Caenorhabditis elegans Hypothetical
           protein F53A9.4 protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 125 DPTGRDFEKXRXNPSPNRTKVS-NXFKS*GIPHTKXNRXLK 6
           DP+G   E  R N  P R+ VS + FKS   PH K N   K
Sbjct: 119 DPSGETVEVRRPN-DPRRSSVSLDVFKSFRDPHDKRNMPAK 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,021,283
Number of Sequences: 27780
Number of extensions: 280876
Number of successful extensions: 647
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)