Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_G03
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692...    31   0.91 
07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434...    31   1.2  
09_06_0072 - 20682424-20682870,20683928-20684854                       30   2.8  
01_06_0367 + 28789824-28790110,28790204-28790744                       30   2.8  
04_04_0796 + 28129350-28130405                                         29   4.8  

>03_06_0300 +
           32967935-32968029,32968975-32969077,32969175-32969244,
           32969464-32969581,32969687-32969744,32969831-32969895,
           32969990-32969996,32970087-32970147,32970757-32970776,
           32970858-32970923,32971126-32971293,32971372-32971629,
           32972098-32972310,32972824-32973099
          Length = 525

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
 Frame = +2

Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTE-----YGRLACDDDDEAAFQVLMFLVRDW 793
           +LSS+ IYNL E ++E D+  L    E     YGR+   D      ++L  + RD+
Sbjct: 136 VLSSVLIYNLPETVREADISRLSFAVEIAEEFYGRVKGQDVAFEPAKLLWLIQRDF 191



 Score = 25.4 bits (53), Expect(2) = 7.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 501 GIVLWSEPIVTRFNDQKVAVVLMDTQ 578
           GI +W  P+    +  KV+V+ +DT+
Sbjct: 90  GIWIWGTPVEMDIDGSKVSVLYLDTE 115



 Score = 21.4 bits (43), Expect(2) = 7.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 351 YRGGKSFLLDFFL 389
           YR GKSFLL+  L
Sbjct: 71  YRSGKSFLLNQLL 83


>07_01_0584 +
           4345134-4345237,4346165-4346267,4346397-4346466,
           4346552-4346590,4346684-4346801,4346894-4346951,
           4347031-4347095,4347281-4347341,4347678-4347779,
           4348005-4348070,4348399-4348443,4348540-4348797,
           4349289-4349501,4350103-4350411,4350461-4350613
          Length = 587

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 486 DRQTTGIVLWSEPIVTRFNDQKVAVVLMDTQ 578
           D +T GI +W  PI    N  KV+V+ +DT+
Sbjct: 101 DTKTKGIWVWGTPIELDVNGSKVSVLYLDTE 131



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTE 721
           +LSSI IYNL E I+E D+  L    E
Sbjct: 152 VLSSILIYNLPETIREADISRLSFAVE 178


>09_06_0072 - 20682424-20682870,20683928-20684854
          Length = 457

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -1

Query: 476 PPNESRQRLVFLAQPRSTITRRGGRF*VSEEEVQQEG 366
           PPN+  Q  VFL  P S   RR G F V  E +  +G
Sbjct: 283 PPNQRMQLEVFLTLPESDYNRRLGVFQVRAEFLSADG 319


>01_06_0367 + 28789824-28790110,28790204-28790744
          Length = 275

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 432 WLGQEDEPLTGFIWRAGCDRQTT 500
           W  +EDE L  F+ R GCDR  T
Sbjct: 25  WTPEEDEVLARFVAREGCDRWRT 47


>04_04_0796 + 28129350-28130405
          Length = 351

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 805 DKVRPITDQEHENLERCLIIIIARQPSVFRKKV 707
           +K R    + HENLERC+  + +    VFR  V
Sbjct: 305 EKARRAAFERHENLERCIASVDSSGEKVFRALV 337


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,299,254
Number of Sequences: 37544
Number of extensions: 396045
Number of successful extensions: 1091
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)