Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G03
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens ... 120 7e-27
AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein. 120 7e-27
AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein. 120 7e-27
AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein. 120 7e-27
BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein p... 113 1e-24
AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-bind... 111 2e-24
AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens ... 111 4e-24
BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A (... 110 7e-24
AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein. 109 1e-23
AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens ... 98 3e-20
BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein. 82 2e-15
CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein. 79 3e-14
AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein. 79 3e-14
AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein. 79 3e-14
BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179... 40 0.015
AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein pr... 40 0.015
>AK026946-1|BAB15598.1| 579|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23293 fis, clone HEP10514. ).
Length = 579
Score = 120 bits (289), Expect = 7e-27
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +3
Query: 249 DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDSA 428
DDH ++L+E+AL ILL++ ++DL +R GKSFLLDF LRY+ ++DS
Sbjct: 69 DDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMY----NKDSQ 124
Query: 429 AWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQKVAVVLMDTQ 578
+W+G +EPLTGF WR GC+R+TTGI +W+E ++ R N KVAV+LMDTQ
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQ 175
Score = 82.2 bits (194), Expect = 2e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+Q+YNL +NI+EDDLQHL LFTEYGRLA ++ + FQ LMFL+RDW+Y
Sbjct: 196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSY 248
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT--LLDSNLXXXXXXXXXXXXAFTPFYGIRKVGVR**** 753
G FD+ ST++D +T+FALST T + NL YG ++ +
Sbjct: 176 GAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYG--RLAMEEIYQ 233
Query: 754 GSVPSSHVLGP*LGVPYQHAFGXEGGEXLLIKRXXI 861
+ L PY+H++G EGG+ L KR +
Sbjct: 234 KPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQV 269
>AF449187-2|AAM97341.1| 579|Homo sapiens ARL6IP2 protein.
Length = 579
Score = 120 bits (289), Expect = 7e-27
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +3
Query: 249 DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDSA 428
DDH ++L+E+AL ILL++ ++DL +R GKSFLLDF LRY+ ++DS
Sbjct: 69 DDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMY----NKDSQ 124
Query: 429 AWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQKVAVVLMDTQ 578
+W+G +EPLTGF WR GC+R+TTGI +W+E ++ R N KVAV+LMDTQ
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQ 175
Score = 82.2 bits (194), Expect = 2e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+Q+YNL +NI+EDDLQHL LFTEYGRLA ++ + FQ LMFL+RDW+Y
Sbjct: 196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSY 248
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT--LLDSNLXXXXXXXXXXXXAFTPFYGIRKVGVR**** 753
G FD+ ST++D +T+FALST T + NL YG ++ +
Sbjct: 176 GAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYG--RLAMEEIYQ 233
Query: 754 GSVPSSHVLGP*LGVPYQHAFGXEGGEXLLIKRXXI 861
+ L PY+H++G EGG+ L KR +
Sbjct: 234 KPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQV 269
>AF449187-1|AAM97342.1| 583|Homo sapiens ARL6IP2 protein.
Length = 583
Score = 120 bits (289), Expect = 7e-27
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +3
Query: 249 DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDSA 428
DDH ++L+E+AL ILL++ ++DL +R GKSFLLDF LRY+ ++DS
Sbjct: 69 DDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMY----NKDSQ 124
Query: 429 AWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQKVAVVLMDTQ 578
+W+G +EPLTGF WR GC+R+TTGI +W+E ++ R N KVAV+LMDTQ
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQ 175
Score = 82.2 bits (194), Expect = 2e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+Q+YNL +NI+EDDLQHL LFTEYGRLA ++ + FQ LMFL+RDW+Y
Sbjct: 196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSY 248
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT--LLDSNLXXXXXXXXXXXXAFTPFYGIRKVGVR**** 753
G FD+ ST++D +T+FALST T + NL YG ++ +
Sbjct: 176 GAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYG--RLAMEEIYQ 233
Query: 754 GSVPSSHVLGP*LGVPYQHAFGXEGGEXLLIKRXXI 861
+ L PY+H++G EGG+ L KR +
Sbjct: 234 KPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQV 269
>AC016995-1|AAX88950.1| 579|Homo sapiens unknown protein.
Length = 579
Score = 120 bits (289), Expect = 7e-27
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = +3
Query: 249 DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDSA 428
DDH ++L+E+AL ILL++ ++DL +R GKSFLLDF LRY+ ++DS
Sbjct: 69 DDHNFELDEEALEQILLQEHIRDLNIVVVSVAGAFRKGKSFLLDFMLRYMY----NKDSQ 124
Query: 429 AWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQKVAVVLMDTQ 578
+W+G +EPLTGF WR GC+R+TTGI +W+E ++ R N KVAV+LMDTQ
Sbjct: 125 SWIGGNNEPLTGFTWRGGCERETTGIQVWNEVFVIDRPNGTKVAVLLMDTQ 175
Score = 82.2 bits (194), Expect = 2e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+Q+YNL +NI+EDDLQHL LFTEYGRLA ++ + FQ LMFL+RDW+Y
Sbjct: 196 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSY 248
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT--LLDSNLXXXXXXXXXXXXAFTPFYGIRKVGVR**** 753
G FD+ ST++D +T+FALST T + NL YG ++ +
Sbjct: 176 GAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYG--RLAMEEIYQ 233
Query: 754 GSVPSSHVLGP*LGVPYQHAFGXEGGEXLLIKRXXI 861
+ L PY+H++G EGG+ L KR +
Sbjct: 234 KPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQV 269
>BC077727-1|AAH77727.1| 541|Homo sapiens DKFZP564J0863 protein
protein.
Length = 541
Score = 113 bits (271), Expect = 1e-24
Identities = 61/119 (51%), Positives = 77/119 (64%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 VEVVKVT-DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKA 404
V+VV V D H+++L+E AL ILL+D ++DL +R GKSF+LDF LRYL +
Sbjct: 27 VQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYS 86
Query: 405 PPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPI-VTRFNDQKVAVVLMDTQ 578
S S WLG +EPLTGF WR G D +TTGI +WSE V + +KVAVVLMDTQ
Sbjct: 87 QKESGHS-NWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQ 144
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+QIYNL +NI+EDDLQ L LFTEYGRLA D+ + FQ LMFLVRDW++
Sbjct: 165 MTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSF 217
Score = 34.7 bits (76), Expect = 0.44
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT 645
G FD+ STV+D +TIFALST T
Sbjct: 145 GAFDSQSTVKDCATIFALSTMT 166
>AF444143-1|AAL37898.1| 558|Homo sapiens brain-specific GTP-binding
protein protein.
Length = 558
Score = 111 bits (268), Expect = 2e-24
Identities = 57/132 (43%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +3
Query: 186 FNGEVMSSLGEAKGVEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGK 365
++ E + +A V+V+ V DDH+++L+E AL ILL + V+D +R GK
Sbjct: 21 WSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 366 SFLLDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFN 542
SFL+DF LRY+ +++S W+G +EPLTGF WR G +R+TTGI +WSE ++ + +
Sbjct: 81 SFLMDFMLRYMY----NQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPD 136
Query: 543 DQKVAVVLMDTQ 578
+KVAV+LMDTQ
Sbjct: 137 GKKVAVLLMDTQ 148
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL LFTEYGRLA ++ FQ L+FLVRDW++
Sbjct: 169 MISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSF 221
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 149 GTFDSQSTLRDSATVFALST 168
>AK023383-1|BAB14552.1| 541|Homo sapiens protein ( Homo sapiens
cDNA FLJ13321 fis, clone OVARC1001703, weakly similar to
Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA.
).
Length = 541
Score = 111 bits (266), Expect = 4e-24
Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Frame = +3
Query: 228 VEVVKVT-DDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKA 404
V+VV V D H+++L+E AL LL+D ++DL +R GKSF+LDF LRYL +
Sbjct: 27 VQVVLVQKDQHSFELDEKALASTLLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYS 86
Query: 405 PPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPI-VTRFNDQKVAVVLMDTQ 578
S S WLG +EPLTGF WR G D +TTGI +WSE V + +KVAVVLMDTQ
Sbjct: 87 QKESGHS-NWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQ 144
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+QIYNL +NI+EDDLQ L LFTEYGRLA D+ + FQ LMFLVRDW++
Sbjct: 165 MTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSF 217
Score = 34.7 bits (76), Expect = 0.44
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT 645
G FD+ STV+D +TIFALST T
Sbjct: 145 GAFDSQSTVKDCATIFALSTMT 166
>BC010708-1|AAH10708.2| 558|Homo sapiens spastic paraplegia 3A
(autosomal dominant) protein.
Length = 558
Score = 110 bits (264), Expect = 7e-24
Identities = 56/132 (42%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +3
Query: 186 FNGEVMSSLGEAKGVEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGK 365
++ E + +A V+V+ V D+H+++L+E AL ILL + V+D +R GK
Sbjct: 21 WSSEEEEPVKKAGPVQVLIVKDEHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 366 SFLLDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFN 542
SFL+DF LRY+ +++S W+G +EPLTGF WR G +R+TTGI +WSE ++ + +
Sbjct: 81 SFLMDFMLRYMY----NQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPD 136
Query: 543 DQKVAVVLMDTQ 578
+KVAV+LMDTQ
Sbjct: 137 GKKVAVLLMDTQ 148
Score = 75.4 bits (177), Expect = 3e-13
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL L TEYGRLA ++ FQ L+FLVRDW++
Sbjct: 169 MISSIQVYNLSQNVQEDDLQHLQLCTEYGRLAMEETFLKPFQSLIFLVRDWSF 221
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 149 GTFDSQSTLRDSATVFALST 168
>AK223436-1|BAD97156.1| 558|Homo sapiens atlastin variant protein.
Length = 558
Score = 109 bits (263), Expect = 1e-23
Identities = 56/132 (42%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Frame = +3
Query: 186 FNGEVMSSLGEAKGVEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGK 365
++ E + +A V+V+ V DDH+++L+E AL ILL + V+D +R GK
Sbjct: 21 WSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGK 80
Query: 366 SFLLDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFN 542
SFL+DF LRY+ +++S W+G +EPLTGF WR G +R+ TGI +WSE ++ + +
Sbjct: 81 SFLMDFMLRYM----YNQESVDWVGDYNEPLTGFSWRGGSEREATGIQIWSEIFLINKPD 136
Query: 543 DQKVAVVLMDTQ 578
+KVAV+LMDTQ
Sbjct: 137 GKKVAVLLMDTQ 148
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL LFTEYGRLA ++ FQ L+FLVRDW++
Sbjct: 169 MISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSF 221
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 149 GTFDSQSTLRDSATVFALST 168
>AK097588-1|BAC05111.1| 567|Homo sapiens protein ( Homo sapiens
cDNA FLJ40269 fis, clone TESTI2026597. ).
Length = 567
Score = 98.3 bits (234), Expect = 3e-20
Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Frame = +3
Query: 273 EDALRM-ILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDSAAWLGQED 449
+DA+ ILL+D ++DL +R GKSF+LDF LRYL + S S WLG +
Sbjct: 68 DDAMESSILLQDHIRDLDVVVVSVAGAFRKGKSFILDFMLRYLYSQKESGHSN-WLGDPE 126
Query: 450 EPLTGFIWRAGCDRQTTGIVLWSEPI-VTRFNDQKVAVVLMDTQ 578
EPLTGF WR G D +TTGI +WSE V + +KVAVVLMDTQ
Sbjct: 127 EPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAVVLMDTQ 170
Score = 77.8 bits (183), Expect = 5e-14
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+QIY+L +NI+EDDLQ L LFTEYGRLA D+ + FQ LMFLVRDW++
Sbjct: 191 MTSSVQIYSLSQNIQEDDLQQLQLFTEYGRLAMDEIFQKPFQTLMFLVRDWSF 243
Score = 34.7 bits (76), Expect = 0.44
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT 645
G FD+ STV+D +TIFALST T
Sbjct: 171 GAFDSQSTVKDCATIFALSTMT 192
>BC053508-1|AAH53508.1| 412|Homo sapiens ARL6IP2 protein protein.
Length = 412
Score = 82.2 bits (194), Expect = 2e-15
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
+ SS+Q+YNL +NI+EDDLQHL LFTEYGRLA ++ + FQ LMFL+RDW+Y
Sbjct: 25 MTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYQKPFQTLMFLIRDWSY 77
Score = 35.5 bits (78), Expect = 0.25
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALSTXT--LLDSNLXXXXXXXXXXXXAFTPFYGIRKVGVR**** 753
G FD+ ST++D +T+FALST T + NL YG ++ +
Sbjct: 5 GAFDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYG--RLAMEEIYQ 62
Query: 754 GSVPSSHVLGP*LGVPYQHAFGXEGGEXLLIKRXXI 861
+ L PY+H++G EGG+ L KR +
Sbjct: 63 KPFQTLMFLIRDWSYPYEHSYGLEGGKQFLEKRLQV 98
>CR457153-1|CAG33434.1| 475|Homo sapiens SPG3A protein.
Length = 475
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL LFTEYGRLA ++ FQ L+FLVRDW++
Sbjct: 86 MISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSF 138
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 LDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQK 551
+DF LRY+ +++S W+G +EPLTGF WR G +R+TTGI +WSE ++ + + +K
Sbjct: 1 MDFMLRYMY----NQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 56
Query: 552 VAVVLMDTQ 578
VAV+LMDTQ
Sbjct: 57 VAVLLMDTQ 65
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 66 GTFDSQSTLRDSATVFALST 85
>AY032844-1|AAK51160.1| 475|Homo sapiens GTPase protein.
Length = 475
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL LFTEYGRLA ++ FQ L+FLVRDW++
Sbjct: 86 MISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSF 138
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 LDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQK 551
+DF LRY+ +++S W+G +EPLTGF WR G +R+TTGI +WSE ++ + + +K
Sbjct: 1 MDFMLRYMY----NQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 56
Query: 552 VAVVLMDTQ 578
VAV+LMDTQ
Sbjct: 57 VAVLLMDTQ 65
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 66 GTFDSQSTLRDSATVFALST 85
>AF131801-1|AAD20047.1| 475|Homo sapiens Unknown protein.
Length = 475
Score = 78.6 bits (185), Expect = 3e-14
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SSIQ+YNL +N++EDDLQHL LFTEYGRLA ++ FQ L+FLVRDW++
Sbjct: 86 MISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSF 138
Score = 72.5 bits (170), Expect = 2e-12
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 LDFFLRYLKAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEP-IVTRFNDQK 551
+DF LRY+ +++S W+G +EPLTGF WR G +R+TTGI +WSE ++ + + +K
Sbjct: 1 MDFMLRYMY----NQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKK 56
Query: 552 VAVVLMDTQ 578
VAV+LMDTQ
Sbjct: 57 VAVLLMDTQ 65
Score = 36.7 bits (81), Expect = 0.11
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFD+ ST+RDS+T+FALST
Sbjct: 66 GTFDSQSTLRDSATVFALST 85
>BC053989-1|AAH53989.1| 631|Homo sapiens zinc finger protein 179
protein.
Length = 631
Score = 39.5 bits (88), Expect = 0.015
Identities = 33/119 (27%), Positives = 48/119 (40%)
Frame = +3
Query: 219 AKGVEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYL 398
A+ + +V++ L A+ L +D P GKSFLL+ L+ L
Sbjct: 134 AEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL 193
Query: 399 KAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRFNDQKVAVVLMDT 575
S G+ L G W G + GI +WS P + +KVAV L+DT
Sbjct: 194 PGLESGEGGRPRGGEAS--LQGCRW--GANGLARGIWMWSHPFLLGKEGKKVAVFLVDT 248
>AB026054-1|BAA84698.1| 632|Homo sapiens brain finger protein
protein.
Length = 632
Score = 39.5 bits (88), Expect = 0.015
Identities = 33/119 (27%), Positives = 48/119 (40%)
Frame = +3
Query: 219 AKGVEVVKVTDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYL 398
A+ + +V++ L A+ L +D P GKSFLL+ L+ L
Sbjct: 134 AEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL 193
Query: 399 KAPPSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTRFNDQKVAVVLMDT 575
S G+ L G W G + GI +WS P + +KVAV L+DT
Sbjct: 194 PGLESGEGGRPRGGEAS--LQGCRW--GANGLARGIWMWSHPFLLGKEGKKVAVFLVDT 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,880,795
Number of Sequences: 237096
Number of extensions: 2079623
Number of successful extensions: 4095
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4070
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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