Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_G03
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 97 1e-20
AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 97 1e-20
Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical pr... 77 2e-14
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Frame = +3
Query: 216 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 389
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 390 RYL----KAP----PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTR-FN 542
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 543 DQKVAVVLMDTQ 578
+++AV+LMDTQ
Sbjct: 148 GEEIAVLLMDTQ 159
Score = 83.0 bits (196), Expect = 3e-16
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SS+QIYNL +NI+EDDLQHL LFTEYGRLA +D FQ L+FLVRDW++
Sbjct: 180 MISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSF 232
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
G FD+ STV+D +TIFALST
Sbjct: 160 GAFDSQSTVKDCATIFALST 179
>AC024817-8|AAU05551.1| 535|Caenorhabditis elegans Hypothetical
protein Y54G2A.2b protein.
Length = 535
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Frame = +3
Query: 216 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 389
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 390 RYL----KAP----PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTR-FN 542
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 543 DQKVAVVLMDTQ 578
+++AV+LMDTQ
Sbjct: 148 GEEIAVLLMDTQ 159
Score = 83.0 bits (196), Expect = 3e-16
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SS+QIYNL +NI+EDDLQHL LFTEYGRLA +D FQ L+FLVRDW++
Sbjct: 180 MISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSF 232
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
G FD+ STV+D +TIFALST
Sbjct: 160 GAFDSQSTVKDCATIFALST 179
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 97.1 bits (231), Expect = 1e-20
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Frame = +3
Query: 216 EAKGVEVVKVTDD--HTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFL 389
E + V VV+V +D H+++LN + L ILL +V D YR GKSFLL+FFL
Sbjct: 29 EPQAVRVVEVVEDTDHSFELNTELLEKILLDPKVADKKVAVIGVAGAYRKGKSFLLNFFL 88
Query: 390 RYL----KAP----PSSRDSAAWLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPIVTR-FN 542
RYL KA D++ W+ + PL+GF WR G +R T GI++WSEP + + N
Sbjct: 89 RYLTWRSKADKVMGEVELDNSQWM-SPNSPLSGFSWRGGSERDTNGILIWSEPFIMKDKN 147
Query: 543 DQKVAVVLMDTQ 578
+++AV+LMDTQ
Sbjct: 148 GEEIAVLLMDTQ 159
Score = 83.0 bits (196), Expect = 3e-16
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDEAAFQVLMFLVRDWAY 799
++SS+QIYNL +NI+EDDLQHL LFTEYGRLA +D FQ L+FLVRDW++
Sbjct: 180 MISSVQIYNLSQNIQEDDLQHLQLFTEYGRLALEDSASKPFQSLLFLVRDWSF 232
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
G FD+ STV+D +TIFALST
Sbjct: 160 GAFDSQSTVKDCATIFALST 179
>Z95559-2|CAB09000.3| 520|Caenorhabditis elegans Hypothetical
protein Y41E3.3 protein.
Length = 520
Score = 76.6 bits (180), Expect = 2e-14
Identities = 48/115 (41%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Frame = +3
Query: 246 TDDHTYQLNEDALRMILLRDEVKDLPXXXXXXXXXYRGGKSFLLDFFLRYLKAPPSSRDS 425
T ++LNE AL +L + +R GKSFLL+FFL YL + S+ S
Sbjct: 38 TQPGKFRLNESALNSVLGHSACANKKIVIISVAGAFRKGKSFLLNFFLEYLYSLHKSQQS 97
Query: 426 AA---WLGQEDEPLTGFIWRAGCDRQTTGIVLWSEPI-VTRFNDQKVAVVLMDTQ 578
+ WL +D L GF WRAG R T GI LW EPI + + AVVLMDTQ
Sbjct: 98 DSSLEWL-TDDCQLHGFHWRAGVKRDTVGIWLWGEPIMIESVTGEMFAVVLMDTQ 151
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Frame = +2
Query: 641 LLSSIQIYNLKENIKEDDLQHLHLFTEYGRLACDDDDE--AAFQVLMFLVRDW 793
++SS+QIYN+ +NI+ED LQHL LF EYGR+A + FQ L+F VRD+
Sbjct: 172 IVSSVQIYNVVDNIQEDALQHLSLFVEYGRIAMEQPHNFGKPFQQLVFCVRDF 224
Score = 31.5 bits (68), Expect = 0.81
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1
Query: 580 GTFDNSSTVRDSSTIFALST 639
GTFDN+ST + T+FALST
Sbjct: 152 GTFDNNSTYQQCMTVFALST 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,946,522
Number of Sequences: 27780
Number of extensions: 320885
Number of successful extensions: 684
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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