Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_F23
         (912 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81487-7|CAB04001.2|  495|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AL021470-4|CAA16294.2|  495|Caenorhabditis elegans Hypothetical ...    29   6.1  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    28   8.1  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    28   8.1  

>Z81487-7|CAB04001.2|  495|Caenorhabditis elegans Hypothetical
           protein Y17D7A.4 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = +2

Query: 542 VLPAPYEAYPQYFVNMEVXNKMDYVKMMDGCLDEKICYNYGIIKENEQFVMYANLFQFPD 721
           V P PY+  P+ F+      K+D  +++   + ++ C   G+ +  E F+ +AN+F   D
Sbjct: 404 VFPEPYKFKPERFIENGKFKKVD--EVIPFSIGKRQCLGEGLAR-IELFLFFANIFNRYD 460

Query: 722 L 724
           +
Sbjct: 461 V 461


>AL021470-4|CAA16294.2|  495|Caenorhabditis elegans Hypothetical
           protein Y17D7A.4 protein.
          Length = 495

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/61 (26%), Positives = 32/61 (52%)
 Frame = +2

Query: 542 VLPAPYEAYPQYFVNMEVXNKMDYVKMMDGCLDEKICYNYGIIKENEQFVMYANLFQFPD 721
           V P PY+  P+ F+      K+D  +++   + ++ C   G+ +  E F+ +AN+F   D
Sbjct: 404 VFPEPYKFKPERFIENGKFKKVD--EVIPFSIGKRQCLGEGLAR-IELFLFFANIFNRYD 460

Query: 722 L 724
           +
Sbjct: 461 V 461


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 613 VVHFIXNFHVDKILRISFVWSR*NEAGGVRALDNSYVVGV*EHSLV 476
           ++H + N+ ++  +RI FV     EAG ++ L  + VV V E+ ++
Sbjct: 743 IIHRLDNYSIETRVRIMFVMGVPVEAGFLKNLRKTAVVRVDENQMI 788


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = -3

Query: 613 VVHFIXNFHVDKILRISFVWSR*NEAGGVRALDNSYVVGV*EHSLV 476
           ++H + N+ ++  +RI FV     EAG ++ L  + VV V E+ ++
Sbjct: 743 IIHRLDNYSIETRVRIMFVMGVPVEAGFLKNLRKTAVVRVDENQMI 788


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,062,949
Number of Sequences: 27780
Number of extensions: 348742
Number of successful extensions: 953
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)