Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F19
(1056 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.010
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 36 0.010
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 36 0.013
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.013
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.27
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.83
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.9
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 26 7.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 32/128 (25%), Positives = 34/128 (26%), Gaps = 3/128 (2%)
Frame = +1
Query: 580 APXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPX 759
AP PP P PPP PAP AP P P
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 760 XPXPRPXXRTRSPXXLPPPXAXXPPHXXPLD---PXAXQXRVXLRPXPXLPXXSXPPXXX 930
P P P PP P PL P A + P LP + P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 931 PPXWXDAP 954
P AP
Sbjct: 480 PAPAPAAP 487
Score = 37.5 bits (83), Expect = 0.003
Identities = 35/138 (25%), Positives = 40/138 (28%), Gaps = 8/138 (5%)
Frame = +1
Query: 580 APXAPPXLXPP-PPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTP 756
AP PP + PP P PP P+ G + P +P RP A T
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 757 XXPXPRPXXRTRSPXXL-----PPPXAXXPPHXXPLDPXAXQXRVXLRPXPXLPXXSXP- 918
P P P R + PPP P P P P S
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 919 -PXXXPPXWXDAPXXLPP 969
PP AP PP
Sbjct: 349 GSIPLPPQGRSAPPPPPP 366
Score = 36.3 bits (80), Expect = 0.007
Identities = 32/123 (26%), Positives = 36/123 (29%), Gaps = 3/123 (2%)
Frame = +1
Query: 610 PPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXXPXPRPXXRT 789
PPP P PP + P P P R +A P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 790 RSPXXLPPPXAXXPPHXXPLDPXAXQXR--VXLRPXPXLPXXSXPPXXXPPXW-XDAPXX 960
+ PP + P P A R L P S PP PP AP
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 961 LPP 969
LPP
Sbjct: 431 LPP 433
Score = 31.9 bits (69), Expect = 0.16
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +1
Query: 592 PPXLXPPPPXXXPPPXPXVXP---PRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXX 762
PP L P P PP P P P P P P P A P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 763 PXPRPXXRTRSPXXLP 810
P P P S LP
Sbjct: 480 PAPAPAAPVASIAELP 495
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 580 APXAPPXLXPPPPXXXP-PPXPXVXPPRRXPAPGXIXXPXPAPXRPHA 720
AP APP L P P P P PP AP P PAP P A
Sbjct: 443 APAAPP-LPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPVA 489
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -2
Query: 677 PGAGXRRGGXTXGXGG-GXXXGGGGXSXGGAXGAXXXTDRGEXGGRXG 537
PG+ RGG G GG GG G GGA G RG GGR G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/65 (36%), Positives = 25/65 (38%)
Frame = -2
Query: 776 GRGXGXXGVXGWGGGXXXXACGRXGAGXGXXMXPGAGXRRGGXTXGXGGGXXXGGGGXSX 597
GRG G G+ GG GR GA G G G RGG G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGG-----GRGGARGGRGGRGGARGGRGGSSGGR 64
Query: 596 GGAXG 582
GGA G
Sbjct: 65 GGAKG 69
Score = 32.7 bits (71), Expect = 0.089
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = -2
Query: 710 RXGAGXGXXMXPGAGXRRGGXTXGXGGGXXXGGGGXSXG-GAXGAXXXTDRGEXGGRXG 537
R G G G RGG G GG G GG G G G G GGR G
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.3 bits (60), Expect = 1.9
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -2
Query: 899 RXGXGRSXTRCXXAXGSSGXXWGGXXAXGGGXXXGDRVRXXGRGXGXXGVXGWGGG 732
R G G S G G GG GG G R GRG G G GG
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.6 bits (56), Expect = 5.9
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = -2
Query: 854 GSSGXXWGGXXAXGGGXXXGDRVRXXGRGXGXXGVXGWG---GGXXXXACGRXGAGXG 690
G G GG GGG R GRG G G G GG + GR GA G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGA---RGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 43/151 (28%), Positives = 47/151 (31%), Gaps = 11/151 (7%)
Frame = +1
Query: 580 APXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXI-XXPXP---APXRPHAXXXXXXXXX 747
AP APP + P P P PP PAP I P P AP P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPP--VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 748 XTPXXPXPRPXXRTRS---PXXLPP---PXAXXPPHXXPLD-PXAXQXRVXLRPXPXLPX 906
+ P P+P P PP P PP P P + V P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP-APS 1175
Query: 907 XSXPPXXXPPXWXDAPXXLPPP*XXXXPSPS 999
PP P P PP P PS
Sbjct: 1176 SGIPPVPKPA--AGVPPVPPPSEAPPVPKPS 1204
Score = 31.9 bits (69), Expect = 0.16
Identities = 42/150 (28%), Positives = 48/150 (32%), Gaps = 10/150 (6%)
Frame = +1
Query: 580 APXAP-PXLXPP---PPXXXPP-PXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXX 744
AP P P PP P PP P P PP P P P PAP
Sbjct: 1130 APPVPVPSGAPPVPKPSVAAPPVPAPSGAPP--VPKPSVAAPPVPAP--SSGIPPVPKPA 1185
Query: 745 XXTPXXPXPRPXXRTRSPXXLPPPXAXXPPHXXP-LDPXAXQXRVXLRPXPXLPXXSXPP 921
P P P + +P +P P PP P P L P P +P PP
Sbjct: 1186 AGVPPVPPP-----SEAP-PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP-VPTAKAPP 1238
Query: 922 XXXP----PXWXDAPXXLPPP*XXXXPSPS 999
P P +P P PSP+
Sbjct: 1239 VPAPSSEAPSVSTPRSSVPSPHSNASPSPT 1268
Score = 31.5 bits (68), Expect = 0.21
Identities = 31/134 (23%), Positives = 38/134 (28%), Gaps = 5/134 (3%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXX 762
P APP + PP P P PP+ P + P +
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 763 PXPRPXXRTRSPXXLPPPXAXXP-PHXXPLDPXAXQXRVXLRPXPXLPXXSXP----PXX 927
P P P P +P P P P P + P P P P
Sbjct: 1023 PVPLP-SADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 928 XPPXWXDAPXXLPP 969
PP AP +PP
Sbjct: 1082 APP--VPAPSGIPP 1093
Score = 28.3 bits (60), Expect = 1.9
Identities = 34/148 (22%), Positives = 40/148 (27%), Gaps = 8/148 (5%)
Frame = +1
Query: 580 APXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXP--APXRPHAXXXXXXXXXXT 753
AP P PP P PP P+ P P AP P
Sbjct: 1040 APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 754 PXXPXPRPXXR---TRSPXXLPP---PXAXXPPHXXPLDPXAXQXRVXLRPXPXLPXXSX 915
P P+P +P PP P PP P+ A P +P S
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP--VPVPSGAPPVPKPSVAAPPVPAPSG 1157
Query: 916 PPXXXPPXWXDAPXXLPPP*XXXXPSPS 999
P P P P P P+
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/79 (26%), Positives = 26/79 (32%)
Frame = +2
Query: 668 PXPGXXXXPXPHPXARTXXXXPXXPNXPRPXXPXPAPXXAXGPXLXCPPXXPPLLPIXXR 847
P P P P P A P P P P P + G PP P +P
Sbjct: 1172 PAPSSGIPPVPKPAAGV-------PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSA 1224
Query: 848 STPXXXNXASRSAPXXPSP 904
P ++ AP P+P
Sbjct: 1225 GLPPVPVPTAK-APPVPAP 1242
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.010
Identities = 31/96 (32%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Frame = -2
Query: 854 GSSGXXWGGXXAXGGGXXXGDRV-----RXXGRGXGXXGVXGWGGGXXXXACGRXGAGXG 690
G +G +GG GG G G G G G+GGG G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 689 XXMXPGAGXRRGGXTXGXGGGXXXGGGGXSXGGAXG 582
PG GG G GGG GGG G G
Sbjct: 244 ----PGGF---GGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 33.5 bits (73), Expect = 0.051
Identities = 29/87 (33%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Frame = -2
Query: 773 RGXGXXGVXGWGGGXXXXACGRXGAGXGXXMXPGAGXRRGGXTXGXGGGXXX-------- 618
RG G G+GGG G G G G G G GG G GGG
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFG-GFGGFGGEGHHHGGH-GGFGGGPGGFEGGPGGF 240
Query: 617 GGGGXSXGGAXGAXXXTDRGEXGGRXG 537
GGG GG G G GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.36
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = -2
Query: 776 GRGXGXXGVXGWGGGXXXXACGRXGAGXGXXMXPGAGXRRGGXTXGXGGGXXXGGGGXSX 597
G G G G+GG G G G G G GG GG GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGG-FGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 596 GGAXGAXXXTDRGEXG 549
GG G G G
Sbjct: 255 GGGPGGFGGGPGGHGG 270
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 35.9 bits (79), Expect = 0.010
Identities = 23/61 (37%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = -2
Query: 713 GRXGAGXGXXMXPGAGXRRGGX----TXGXGGGXXXGGGGXSXGGAXGAXXXTDRGEXGG 546
G G G G G RGG G GGG G GG S GG+ G RG G
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Query: 545 R 543
R
Sbjct: 193 R 193
Score = 30.7 bits (66), Expect = 0.36
Identities = 23/65 (35%), Positives = 23/65 (35%)
Frame = -2
Query: 776 GRGXGXXGVXGWGGGXXXXACGRXGAGXGXXMXPGAGXRRGGXTXGXGGGXXXGGGGXSX 597
G G G G GG R G G G G RGG G GG G G S
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFG-GNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Query: 596 GGAXG 582
GG G
Sbjct: 188 GGFRG 192
Score = 28.7 bits (61), Expect = 1.5
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = -2
Query: 797 GDRVRXXGRGXGXXGVXGWGGGXXXXACGRXGAGXGXXMXPG-AGXRRGGXTXGXGGGXX 621
G R GRG G G G GG G G G G G RGG G GG
Sbjct: 129 GARNGPAGRG-GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Query: 620 XGGGG 606
G G
Sbjct: 188 GGFRG 192
Score = 27.9 bits (59), Expect = 2.5
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -2
Query: 692 GXXMXPGAGXRRGGXTXGXGGGXXXGGGGXSXGGAXGAXXXTDRGEXGGRXG 537
G P RGG G GG GG G G+ G GG G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 35.5 bits (78), Expect = 0.013
Identities = 29/123 (23%), Positives = 34/123 (27%), Gaps = 2/123 (1%)
Frame = +1
Query: 610 PPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXXPXPRPXXRT 789
PPP P + PP PG P P P P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 790 RSPXXLPPPXAXXPPHXXPLDPXAXQXRVXLRPXP--XLPXXSXPPXXXPPXWXDAPXXL 963
PPP P P P + + P P P PP PP + +
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP---PPMHHEPGEHM 324
Query: 964 PPP 972
PPP
Sbjct: 325 PPP 327
Score = 31.9 bits (69), Expect = 0.16
Identities = 31/135 (22%), Positives = 37/135 (27%), Gaps = 8/135 (5%)
Frame = +1
Query: 592 PPXLXPPPPXXXPP------PXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXT 753
PP + P PP P + PP PG P P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 754 PXXPXPRPXXRTRSPXXLPPPXAXXPPHXXPLDPXAXQXRVXLRPXP--XLPXXSXPPXX 927
P P PPP P P P + + P P P PP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP-- 326
Query: 928 XPPXWXDAPXXLPPP 972
PP + +PPP
Sbjct: 327 -PPMHHEPGEHMPPP 340
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.013
Identities = 26/80 (32%), Positives = 28/80 (35%)
Frame = +1
Query: 592 PPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXXPXP 771
PP PP P PPP P PP AP I P P +P A P P
Sbjct: 139 PPTSAPPRPSI-PPPSPASAPPIPSKAP-PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 772 RPXXRTRSPXXLPPPXAXXP 831
P P PPP + P
Sbjct: 197 MP------PKVPPPPLSQAP 210
Score = 34.7 bits (76), Expect = 0.022
Identities = 23/86 (26%), Positives = 25/86 (29%)
Frame = +1
Query: 697 PAPXRPHAXXXXXXXXXXTPXXPXPRPXXRTRSPXXLPPPXAXXPPHXXPLDPXAXQXRV 876
PAP P + P P P P P PP + PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 877 XLRPXPXLPXXSXPPXXXPPXWXDAP 954
P P PP PP AP
Sbjct: 188 PSLPSAVPP---MPPKVPPPPLSQAP 210
Score = 33.5 bits (73), Expect = 0.051
Identities = 23/83 (27%), Positives = 27/83 (32%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXX 762
P P PP P PP + PP + AP + P AP P A P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAP--VKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Query: 763 PXPRPXXRTRSPXXLPPPXAXXP 831
P +R P PP P
Sbjct: 208 QAPVANTSSR-PSSFAPPAGHAP 229
Score = 32.7 bits (71), Expect = 0.089
Identities = 28/112 (25%), Positives = 34/112 (30%), Gaps = 1/112 (0%)
Frame = +1
Query: 589 APPX-LXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXXP 765
APP PPP PP P PP P P P A P P
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Query: 766 XPRPXXRTRSPXXLPPPXAXXPPHXXPLDPXAXQXRVXLRPXPXLPXXSXPP 921
P P + P + PP + + + R P +P S PP
Sbjct: 203 PP-PLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNR-GPSIPSASVPP 252
Score = 30.7 bits (66), Expect = 0.36
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 7/101 (6%)
Frame = +1
Query: 580 APXAPPXLXPPP-------PXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXX 738
A APP PP P PP P + PP AP P AP P +
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP---PIPSKAPPIPSS-----L 171
Query: 739 XXXXTPXXPXPRPXXRTRSPXXLPPPXAXXPPHXXPLDPXA 861
P P P P +PP PP P A
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVA 212
Score = 30.7 bits (66), Expect = 0.36
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 580 APXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPX 759
AP P P P PP P V PP AP P+ P A +P
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPA-GHAPNVTSESPK 237
Query: 760 XPXPRPXXRTRSPXXLPP 813
P P + S +PP
Sbjct: 238 FPNRGPSIPSASVPPVPP 255
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/77 (24%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = +2
Query: 674 PGXXXXPXPHPXARTXXXXPXXPNXPRPXXPXPAPXXAXGPXL--XCPPXXPPLLPIXXR 847
P P P R P P+ P P P + P + PP P P+ +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV--K 182
Query: 848 STPXXXNXASRSAPXXP 898
S P + S P P
Sbjct: 183 SPPSAPSLPSAVPPMPP 199
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.27
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Frame = +1
Query: 628 PPPXPXVXPPRRXPAPGXIXXPXPAPXRPHAXXXXXXXXXXTPXXPXPRPXXRTR--SPX 801
PPP P V P PAP + P P P P P P P + S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 802 XLPPPXAXXPP 834
P P A P
Sbjct: 793 YAPAPQAEPEP 803
Score = 30.7 bits (66), Expect = 0.36
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 583 PXAPPXLXPPP---PXXXPPPXPXVX-PPRRXPAPGXIXX-PXPAPXRPHA 720
P P + P P P PPP P + PP P PG P P P P A
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.9 bits (64), Expect = 0.63
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +1
Query: 568 VLXXAPXAPPXLXPPPPXXX----PPPXPXV-XPPRRXPAPGXIXXPXPAPXRP 714
+L P PP + P P PPP P + PP P PG P P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.83
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +1
Query: 589 APPXLX---PPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRP 714
APP + PPPP PP P PP P P PA P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSA-PPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +1
Query: 829 PPHXXPLDPXAXQXRVXLRPXPXLPXXSXPPXXXPPXWXDAPXXLPPP*XXXXPSPS 999
P P+ P + P P P S PP P P PPP +PS
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAP 675
P PP PPPP PP P PP P P
Sbjct: 1707 PPPPPMSVPPPPSA--PPMP-AGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXP 699
P P + PPP P P PP PA P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.1 bits (57), Expect = 4.4
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +1
Query: 754 PXXPXPRPXXRTRSPXXLPPPXAXXPPHXXPLDPXAXQXRVXLRPXPXLPXXSXPPXXXP 933
P P + +P PPP + PP P P P P LP S P P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS----APPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.9
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAPGXIXXPXPAPXRP 714
P P PP PP P + P AP P AP P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.9
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Frame = +2
Query: 698 PHPXARTXXXXPXXPNXPRPXXPXP-APXXAXGPXLXCPPXXPPLLPIXXRSTPXXXNXA 874
P A P P P P P AP GP P PP P+ S P N
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP----PSAPPP--PLPASSAPSVPNPG 1747
Query: 875 SRSA 886
RSA
Sbjct: 1748 DRSA 1751
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPP 657
P P PPPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 607 PPPPXXXPPPXPXVXPPRRXPAP 675
PP PPP P PP + P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 583 PXAPPXLXPPPPXXXPPPXPXVXPPRRXPAP 675
P PP PP PPP P R+ P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 256 DLDLSC*ANSHSLFPVGLLSTFVDLC 179
DLD + NSHS+ VG L + LC
Sbjct: 653 DLDWTSTPNSHSILAVGFLHDVILLC 678
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,194,680
Number of Sequences: 5004
Number of extensions: 34612
Number of successful extensions: 317
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 555217708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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