Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F13
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048... 52 8e-07
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656... 52 8e-07
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767... 52 8e-07
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576... 52 8e-07
12_02_1174 - 26696869-26698191 31 0.87
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.5
02_05_0396 - 28600855-28601475,28601579-28601761,28601970-286021... 30 2.7
03_01_0515 - 3864796-3865425 29 4.6
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 4.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 6.1
12_02_1255 + 27360958-27362682 28 8.1
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.1
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.1
>06_03_0409 -
20503480-20503678,20504522-20504717,20504805-20504847,
20505632-20505739,20505848-20505850
Length = 182
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 151 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQ 249
N MR + ++KL LNI VGESGDRLTRA+KVLEQ
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQ 41
>05_02_0095 +
6564703-6564705,6564848-6564955,6565153-6565195,
6565303-6565409,6566310-6566395,6566396-6566594
Length = 181
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 151 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQ 249
N MR + ++KL LNI VGESGDRLTRA+KVLEQ
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQ 41
>02_02_0195 +
7676014-7676094,7676111-7676218,7676307-7676349,
7676449-7676648
Length = 143
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 151 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQ 249
N MR + ++KL LNI VGESGDRLTRA+KVLEQ
Sbjct: 35 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQ 67
>01_01_0745 +
5769150-5769152,5769268-5769375,5769812-5769854,
5769945-5770140,5770836-5771034
Length = 182
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +1
Query: 151 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQ 249
N MR + ++KL LNI VGESGDRLTRA+KVLEQ
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASKVLEQ 41
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.5 bits (68), Expect = 0.87
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 702 PXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P PP P PP P PP P P P PP
Sbjct: 208 PKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPP 251
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 684 PXXXXXPXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P P PP P PP P PP PP P P PP
Sbjct: 137 PPHRPPPVKPQPPPSLP----PPPPPPPPPPPPRPPSVKPPVVQPKPQPP 182
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Frame = +3
Query: 672 PXXXPXXXXXPXXXXPPXXXPXXXXPPXPXX---PPXPPXXXXXXXXPXXXXXPXPP 833
P P P PP P PP P PP PP P P PP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 720 PXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P P PP P PP PP P P PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPP 572
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 702 PXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P PP PP P PP PP P PP
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPP 591
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +3
Query: 702 PXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P P P PP P PP PP P PP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
>02_05_0396 -
28600855-28601475,28601579-28601761,28601970-28602129,
28602217-28602795,28603044-28603618,28604161-28604176,
28605566-28605663,28605774-28606286
Length = 914
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 143 LSFGTFVLLFIFLQRRRWYTRHDYNFS 63
L FGT F+F R++W+ R++Y S
Sbjct: 831 LLFGTIFNFFVFRYRKKWWERYNYILS 857
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 684 PXXXXXPXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P P PP PP P PP PP P P P
Sbjct: 62 PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +3
Query: 684 PXXXXXPXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
P P P P PP P P PP P P PP
Sbjct: 71 PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 702 PXXXXPPXXXPXXXXPPXPXXPPXPP 779
P PP P PP P PP PP
Sbjct: 349 PKLMPPPPPPPPPPPPPPPPPPPRPP 374
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 702 PXXXXPPXXXPXXXXPPXPXXPPXPP 779
P PP P PP P PP PP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPP 378
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 717 PPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXPXPP 833
PP P PP P PP PP P P PP
Sbjct: 264 PPRPPPPQVPPPPPQAPPPPPPNAPMGMPP---RIPPPP 299
>12_02_1255 + 27360958-27362682
Length = 574
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -3
Query: 272 GFLXHLLSCSNTLAARVSLSPDSPTQMFKQSFLI*RFRITFLELSFGTFVLLFIFLQRRR 93
G+L +S + R+ +P SPT ++ F ++ L+ ++L+ I LQ+R
Sbjct: 187 GWLPAAISVAFLGTIRIIRAPRSPTAARREYRAFCGF--LYVSLALAAYLLVVIVLQKRF 244
Query: 92 WYTRHDYNFS 63
+TR +Y S
Sbjct: 245 KFTRAEYAVS 254
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 672 PXXXPXXXXXPXXXXPPXXXPXXXXPPXPXXPPXPPXXXXXXXXPXXXXXP 824
P P P PP PP P PP PP P P
Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 672 PXXXPXXXXXPXXXXPPXXXPXXXXPPXPXXPPXPP 779
P P P PP P P P PP PP
Sbjct: 345 PSNAPPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPP 380
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,179,873
Number of Sequences: 37544
Number of extensions: 216470
Number of successful extensions: 1695
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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