Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_F11
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0160 - 1212295-1213586,1213828-1213976,1214288-1214445,121...    31   1.7  
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853...    30   2.9  
04_03_0544 - 16970746-16970814,16971295-16971693                       29   5.1  
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356...    29   5.1  
08_01_0455 + 4012857-4013735                                           29   6.7  
10_08_0153 - 15240707-15241019,15241269-15241723                       28   8.8  
10_01_0127 - 1519803-1520036,1520802-1521095,1521840-1522614,152...    28   8.8  

>12_01_0160 -
           1212295-1213586,1213828-1213976,1214288-1214445,
           1214860-1215004,1215102-1215226
          Length = 622

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 501 FKKYSQLGVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEI 659
           F+K    G A LPDD+ + L +  +G++ N  T ++   K+ S C    + +I
Sbjct: 428 FQKPFVGGFAILPDDEDEQLEKNDNGVKINSGTVQLTDDKDTSLCSRQTDSKI 480


>04_04_0639 +
           26883810-26883821,26884131-26884307,26885276-26885339,
           26886614-26887734,26888193-26888481,26888528-26888658,
           26888910-26889133,26889220-26889286,26889744-26889803,
           26889896-26889979,26890290-26890301
          Length = 746

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 648 EPEITEIFSTSQDPEELKHAWVEWHNAAGATAKKNFTDYVNLYNEAAKLNGFD 806
           EPE  E+    ++ +E K A  E   A  A  KK+F   +  Y +A +L+  D
Sbjct: 390 EPEPMEVTEEEKERKERKAAAQEEKEAGNAAYKKDFETAIQHYTKAMELDDED 442


>04_03_0544 - 16970746-16970814,16971295-16971693
          Length = 155

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +1

Query: 343 LAEWEYTSXYHEGERREID--TNSPGALASRESSLGRRPRCTGGRTSR 480
           LAE E  S    G RR++   T +  A+  R  S GRRP  T GR ++
Sbjct: 88  LAEGEAASS--RGRRRQLQRTTAATAAVPQRRISRGRRPEATQGRRTK 133


>01_01_0484 -
           3558941-3559303,3559439-3559560,3560596-3560743,
           3560853-3561491,3562154-3562450,3562553-3563407,
           3564363-3564545,3565041-3565118,3565762-3565974,
           3566075-3566238,3566357-3566445,3566761-3566891,
           3566980-3567148,3567255-3567327,3567525-3567606,
           3567677-3567808,3568743-3568818,3568965-3569065,
           3569446-3569636,3569738-3569912,3570604-3570854,
           3571327-3571603,3572184-3572267,3572496-3573206
          Length = 1867

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -3

Query: 611 ADLRSGVVRFHSRYSSHQSLEFIV-WQSRNA*LTIFLEHSTQREILEVLPPVHLGLLP 441
           A + SG+   H + S  + L F++ W+  NA  T    H    EI+ VLP ++L + P
Sbjct: 328 AFILSGLEFEHEQLSGLKLLAFLIEWRHENALRTNEAVHHFSEEIVCVLPVINLVISP 385


>08_01_0455 + 4012857-4013735
          Length = 292

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +3

Query: 678 SQDPEELKHAWVEWHNAAGATAKKNFTDYVNLYNEAAKLNGFDN 809
           + + EE++ A   W   A A A++  + Y NL +    +N F +
Sbjct: 247 AMESEEMRRAAARWKAQAEAAARRGGSSYENLQSMVEVINSFSS 290


>10_08_0153 - 15240707-15241019,15241269-15241723
          Length = 255

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 748 FFAVAPAALCHSTQACFNSSGSWLVENISVISGSKDRS 635
           FFAV  AALC  T A   ++G W V   +   G KD S
Sbjct: 6   FFAVLAAALC-ITSASAAAAGGW-VSGTATFYGGKDAS 41


>10_01_0127 -
           1519803-1520036,1520802-1521095,1521840-1522614,
           1524574-1525412
          Length = 713

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/73 (20%), Positives = 37/73 (50%)
 Frame = +3

Query: 489 LRRMFKKYSQLGVAALPDDKFQALMRTVSGMESNYATAKICSYKNESKCDLSLEPEITEI 668
           + ++F+K  +L   A    + QAL + ++G+   Y+  ++   +N      +++P +T +
Sbjct: 109 ISKLFRKAKELHQIADAIKEAQALAQQMAGLRERYSGLEL---QNSGMVTSTIDPRLTAL 165

Query: 669 FSTSQDPEELKHA 707
           +  + D   + HA
Sbjct: 166 YIDATDLVGIDHA 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,009,850
Number of Sequences: 37544
Number of extensions: 430972
Number of successful extensions: 1267
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)