Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F10
(884 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0202 - 1638978-1639571 73 2e-13
02_01_0158 - 1103461-1104186 73 3e-13
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396... 30 2.8
12_01_0240 + 1801797-1802014,1802314-1802411,1802556-1802638,180... 29 3.8
01_06_1623 - 38716606-38717424 29 3.8
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 29 5.0
04_04_1582 - 34590698-34591199,34593849-34594690 29 5.0
04_04_1004 + 30035704-30035934,30036030-30036287,30036382-300364... 29 5.0
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 29 6.6
03_01_0483 + 3689155-3689814 29 6.6
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 28 8.7
04_04_0306 + 24280773-24280776,24280906-24280929,24281023-242811... 28 8.7
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427... 28 8.7
03_05_0145 + 21254448-21255488 28 8.7
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 28 8.7
>08_01_0202 - 1638978-1639571
Length = 197
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 430
+E+V GTVKWF+ G+GFI +D ED+FVHQ+++ + RS+ DG+ VEF+V +
Sbjct: 3 SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGS 58
Query: 431 GEKG-FEAAGVTGPGGEPVK-GSPYAADKRRGY 523
G G +A VT PGG + GS + RGY
Sbjct: 59 GNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGY 91
>02_01_0158 - 1103461-1104186
Length = 241
Score = 72.9 bits (171), Expect = 3e-13
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 430
A + GTVKWFN G+GFI+ +D ED+FVHQ++I + RS+ +GE VEFA+
Sbjct: 4 AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISE 59
Query: 431 GEKG-FEAAGVTGPGGEPVKG 490
E G +A VTGP G VKG
Sbjct: 60 SEDGRTKAVDVTGPDGSFVKG 80
>03_06_0157 -
32039020-32039175,32039267-32039338,32039478-32039602,
32039678-32040559,32040623-32040692,32041248-32041739,
32041985-32042044,32042541-32042618,32043322-32044344
Length = 985
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 401 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 490
GE+ E ++ GE E V GPGGEP G
Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417
>12_01_0240 +
1801797-1802014,1802314-1802411,1802556-1802638,
1802730-1802856,1803168-1803231,1803347-1803444,
1803526-1803610,1803723-1803846,1804153-1804254,
1804869-1804933,1805435-1805516,1805981-1806064
Length = 409
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 785 LPAPPGIARTHSAEPSSIHWARTSPTASTAKI 690
+P PP + SA PS+ A+ SP++S+A++
Sbjct: 9 MPLPPAAVASSSAAPSTDAQAQRSPSSSSARV 40
>01_06_1623 - 38716606-38717424
Length = 272
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 821 HPGHFGAEPDFVLPAPPGIARTHSAEPSSIH 729
HP A PD LP PPG RT E +++
Sbjct: 23 HPIPATAVPDITLPVPPGERRTTRPESETVY 53
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 13/94 (13%)
Frame = +2
Query: 278 WFNVKSGYGF-INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGE--------AVEFAVVA 430
W NV SG R +E V R +P +A + G E VA
Sbjct: 8 WINVSSGLDSGRQRGRRREGALVAWGGAQRTSPVEAAARMESGGWHRRTSMIVREELEVA 67
Query: 431 GE----KGFEAAGVTGPGGEPVKGSPYAADKRRG 520
G+ G EA G +GPGGE D RRG
Sbjct: 68 GDGRRASGVEAPGGSGPGGERTMAPANIDDSRRG 101
>04_04_1582 - 34590698-34591199,34593849-34594690
Length = 447
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 395 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 517
GDG E + G+KG G G GG KGS ++++ R
Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269
>04_04_1004 +
30035704-30035934,30036030-30036287,30036382-30036479,
30036574-30037137,30037232-30037484,30037576-30037758,
30037839-30038465
Length = 737
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -1
Query: 770 GIARTHSAEPSSIHWARTSPTASTAKIATEKTALRWYNASFLTLISLCT 624
G+ R + EP+ + W ++ S + EK LR A F + +C+
Sbjct: 171 GLMRKYVVEPAHMWWPQSLVQVSLLRALHEKENLRMTRAKFFLIALICS 219
>03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 809 FGAEPDFVLPAPPGIARTHSAEPSSIHWARTSPTASTAKIATEKTALR 666
+ ++ + +L AP G +T SAE + +H T P IA K +R
Sbjct: 1294 YHSDNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVVYIAPLKAIVR 1341
>03_01_0483 + 3689155-3689814
Length = 219
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 395 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 520
GDG A AG G +AA G G +PV+GS +D RG
Sbjct: 62 GDGGADPVRGSAG--GSDAARGDGGGADPVRGSAGGSDAARG 101
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 785 LPAPPGIAR--THSAEPSSIHWARTSPTASTAKIATEKT 675
+P PP +A+ T SA PS+ A T P AST A +T
Sbjct: 1 MPPPPSLAQPPTTSATPSTEPAAATEPAASTEPGADAQT 39
>04_04_0306 +
24280773-24280776,24280906-24280929,24281023-24281123,
24281359-24281502,24281667-24281782,24281869-24281968,
24282068-24282214,24282329-24282389,24282480-24282577,
24283118-24283260,24283374-24283457,24283538-24283627,
24284018-24284063
Length = 385
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 733 IEEGSAECVRAIPGGAGRTKSGSAPKWPGWRCLSYNIKPTAGGXA 867
I EG V AI S+ W G R S+NI P++ G A
Sbjct: 220 IVEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAA 264
>03_06_0609 -
35042276-35042388,35042476-35042527,35042624-35042725,
35043546-35043745,35045258-35045336,35045541-35045595,
35045947-35046122,35046386-35046988,35047077-35047265,
35048150-35048201,35048289-35048356,35048873-35048911,
35048912-35048970,35049639-35049782,35050136-35050238,
35050368-35050467,35050596-35050612
Length = 716
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 466 TSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHK 338
T N ++ FLP G + L + D ++ W ++ + SL HK
Sbjct: 293 TENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHK 333
>03_05_0145 + 21254448-21255488
Length = 346
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 520 LPPPIFPSXKVADEAVKELHAEED*DVVDPRPTKGVHKEMRVKKE 654
LPPP+ V +E VKE+ +E V PRP KE+ +KE
Sbjct: 35 LPPPVV----VEEEEVKEVLSETAVPVSRPRPPPEPEKEVVKRKE 75
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 245 VIAEKVSGTVKWFNVKSGYGF--INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEF 418
+++EK GT +V+S + +N N + ED+ HQ A+ + +S G G+ +
Sbjct: 281 MVSEKNGGTD---SVESAFDNENVNSNISHEDMHQHQKVNAKGGRKGRYKSQGRGQIQQN 337
Query: 419 AVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGY 523
G A + +P+ G P D RG+
Sbjct: 338 TSGQGHVSSPATSGSDHVNKPIPG-PRMPDGTRGF 371
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,284,843
Number of Sequences: 37544
Number of extensions: 391781
Number of successful extensions: 1577
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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