BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F10
(884 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding pr... 25 3.1
AF437888-1|AAL84183.1| 154|Anopheles gambiae odorant binding pr... 25 3.1
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 24 5.4
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 24 5.4
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 24 5.4
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 24 5.4
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 7.1
>AY146729-1|AAO12089.1| 156|Anopheles gambiae odorant-binding
protein AgamOBP5 protein.
Length = 156
Score = 25.0 bits (52), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 164 FRYQPWCNWRTAMVAKMVKYSTTSPR--CSPLFVVTSDKTQNLKEFXYSVDRXL 9
F + P+ + AM K + S R C+P F V+++ NL+ ++ DR L
Sbjct: 23 FFFIPFPSVECAMTRKQLINSMDMMRSACAPKFKVSTEMLDNLRGGIFAEDREL 76
>AF437888-1|AAL84183.1| 154|Anopheles gambiae odorant binding
protein protein.
Length = 154
Score = 25.0 bits (52), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 164 FRYQPWCNWRTAMVAKMVKYSTTSPR--CSPLFVVTSDKTQNLKEFXYSVDRXL 9
F + P+ + AM K + S R C+P F V+++ NL+ ++ DR L
Sbjct: 21 FIFIPFPSVECAMTRKQLINSMDMMRSACAPKFKVSTEMLDNLRGGIFAEDREL 74
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 389 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 475
++GD E AV ++GF A+G G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 389 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 475
++GD E AV ++GF A+G G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 389 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 475
++GD E AV ++GF A+G G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 5.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 389 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 475
++GD E AV ++GF A+G G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 794 DFVLPAPPGIARTHSAEPSSIHWARTS 714
DF+L + R H A SS+H R +
Sbjct: 3330 DFILQRLQSVLREHCATDSSVHVRRNA 3356
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,549
Number of Sequences: 2352
Number of extensions: 13292
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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