Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_F06
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z68105-2|CAA92118.1|  270|Caenorhabditis elegans Hypothetical
           protein F13E6.3 protein.
          Length = 270

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 480 LKTMVLKYNFFT--CRFQVGSLIQTLVGFSTLCWHKRNRCLLQ*YLLQHPSGLGRGL*YP 307
           LK ++L +  F+  C F V  +I +    ST+C H R   + Q +L++  S + +     
Sbjct: 72  LKAVMLLFKLFSYYCSFSVSHIISSFRPLSTMCDHPR---IFQMHLIERASKVYKWTETA 128

Query: 306 *SVVVPD 286
            S++V D
Sbjct: 129 DSIIVDD 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,377,316
Number of Sequences: 27780
Number of extensions: 257835
Number of successful extensions: 551
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)