Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_F03
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.30 
02_02_0498 - 10973243-10973345,10973850-10973882,10974104-109741...    29   3.7  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     29   6.5  
01_06_0451 - 29476892-29477516,29477600-29477843,29478313-294787...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548...    28   8.6  
02_03_0099 + 15206282-15206917                                         28   8.6  
01_01_1201 + 9678893-9679311,9679415-9679721                           28   8.6  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 725 RKRHASRREKGGQVSGKRQGRKQESARGSFQGETPG 618
           R R   RR  GG+V+G+   R +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>02_02_0498 -
           10973243-10973345,10973850-10973882,10974104-10974166,
           10975934-10976004,10976703-10976789,10976870-10976983,
           10977395-10977508,10977784-10977844,10978608-10978923,
           10979031-10979721,10979948-10980073,10980180-10980247,
           10980314-10980449,10981109-10981238,10981266-10981382,
           10981614-10981763,10982158-10982266,10982584-10982701,
           10984143-10984168,10984219-10984256,10986267-10986373
          Length = 925

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 714 VALSHXSRCRYLSSXVGRSLQAGLCCTNPPFSPTA 818
           + +SH   CR+      R+++A  C T+  FSPT+
Sbjct: 702 LTISHAVLCRFGKVLTSRAIRAAHCLTSIQFSPTS 736


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 637 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAN-AAFL 506
           SRGK L+S  + R  PP   + + V+ + GGG  G  P    AFL
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGTILAFL 69


>01_06_0451 -
           29476892-29477516,29477600-29477843,29478313-29478714,
           29481164-29481358,29481418-29481537,29481615-29481683,
           29481901-29481999,29483857-29483946,29484049-29484180,
           29485062-29485173
          Length = 695

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 496 PGTVKRPRLLAFFHRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSPWKLP 645
           P  ++ PRL +    ++PP   S++  ++ E+  P  TI   G++   LP
Sbjct: 70  PSQLQTPRLQSLGLNVKPPAATSRRVNVQQELYAPSPTISHRGLAIPPLP 119


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1508 -
           30653967-30654245,30654342-30654631,30654773-30654841,
           30654854-30654921,30655016-30655492,30655578-30655874,
           30655974-30656824,30656917-30656990,30657270-30657292,
           30657709-30657772,30658098-30658370,30658511-30658587,
           30658686-30658912
          Length = 1022

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 565 QKSTLKSEVAKPDRTIKIPGV-SPWKLPRALSCFRPCRLPDTCPPFSLRE 711
           Q   L+  V  P RT+   G  + +  P  L+C  PC L   CP  +L +
Sbjct: 158 QNINLQDAVNFPSRTLDCRGCCAGFFCPHGLTCMIPCPLGAYCPESTLNK 207


>02_03_0099 + 15206282-15206917
          Length = 211

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 509 KGRVCWRFSIGSAPLXEHHKNRRSSQRW 592
           KG       +G  P  ++H++RRS+ RW
Sbjct: 167 KGVEVLHVGVGKGPSLQNHRDRRSTSRW 194


>01_01_1201 + 9678893-9679311,9679415-9679721
          Length = 241

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -3

Query: 779 SLERTTYXRTEIPTA*XMRKRHASRREKGGQVSGKRQGRKQESAR---GSFQGETPG 618
           S++++   R E        + HA+RR++ G   G   G  QESAR   G+ + + PG
Sbjct: 3   SMQKSREERAEAAAHRAADELHAARRDEPGGGGGGMLGTVQESARSLLGAVRDKIPG 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,416,627
Number of Sequences: 37544
Number of extensions: 498603
Number of successful extensions: 1522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)