Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F03
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p pro... 30 3.7
AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblasto... 30 3.7
AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related p... 30 3.7
AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA... 30 3.7
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 30 4.8
U31961-5|AAA84404.1| 424|Drosophila melanogaster protein ( Dros... 29 8.5
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 29 8.5
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 8.5
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 8.5
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 8.5
AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-P... 29 8.5
>AY071301-1|AAL48923.1| 783|Drosophila melanogaster RE32990p
protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 765 RSLQAGLCCTNPPFSPTAAPLS 830
R Q+G C ++PP SP A+PLS
Sbjct: 728 RVCQSGSCSSHPPSSPAASPLS 749
>AF197059-1|AAF62399.1| 783|Drosophila melanogaster retinoblastoma
protein homologRBF2 protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 765 RSLQAGLCCTNPPFSPTAAPLS 830
R Q+G C ++PP SP A+PLS
Sbjct: 728 RVCQSGSCSSHPPSSPAASPLS 749
>AF195899-1|AAF66827.1| 782|Drosophila melanogaster RB-related
protein RBF2 protein.
Length = 782
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 765 RSLQAGLCCTNPPFSPTAAPLS 830
R Q+G C ++PP SP A+PLS
Sbjct: 728 RVCQSGSCSSHPPSSPAASPLS 749
>AE014297-2127|AAF55258.1| 783|Drosophila melanogaster CG5083-PA
protein.
Length = 783
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 765 RSLQAGLCCTNPPFSPTAAPLS 830
R Q+G C ++PP SP A+PLS
Sbjct: 728 RVCQSGSCSSHPPSSPAASPLS 749
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 487 SKRPGTVKRPRLLAFFHRLRPPXRASQKSTLKSEVAKPDRTIKIPGVSP 633
S R GT KRPR++ RPP AS TLK + +RT + + P
Sbjct: 3717 SNRFGTTKRPRVVN-----RPPGVASPNLTLKPVASDYERTTPLTPLKP 3760
>U31961-5|AAA84404.1| 424|Drosophila melanogaster protein (
Drosophila melanogasterbithorax complex (BX-C), complete
sequence. ).
Length = 424
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
ES +VC G LP+P L C + GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 719 RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 618
+H + KGGQ G++QG+ Q +G QG+TPG
Sbjct: 1854 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 1883
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 719 RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 618
+H + KGGQ G++QG+ Q +G QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 719 RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 618
+H + KGGQ G++QG+ Q +G QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 719 RHASRREKGGQVSGKRQGRKQESARGSFQGETPG 618
+H + KGGQ G++QG+ Q +G QG+TPG
Sbjct: 1989 KHKGPQPKGGQ--GQQQGQGQGQGQG--QGQTPG 2018
>AE014297-2268|AAF55361.3| 417|Drosophila melanogaster CG10349-PA
protein.
Length = 417
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 303 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 398
ES +VC G LP+P L C + GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,711,939
Number of Sequences: 53049
Number of extensions: 775464
Number of successful extensions: 1926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1919
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -