Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_F02
(878 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 235 8e-61
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 217 4e-55
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 208 1e-52
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 195 1e-48
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 186 5e-46
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 151 3e-35
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 5e-35
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 146 6e-34
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 129 1e-28
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 125 2e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 4e-27
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 114 2e-24
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 110 5e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 7e-23
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 108 2e-22
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 107 4e-22
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 107 5e-22
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 106 8e-22
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 101 2e-20
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 98 3e-19
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 93 1e-17
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 92 1e-17
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 91 5e-17
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 90 6e-17
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 2e-16
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 88 3e-16
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 87 7e-16
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 86 1e-15
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 85 2e-15
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 2e-15
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 84 4e-15
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 81 3e-14
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 80 8e-14
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 79 2e-13
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 77 4e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 71 3e-11
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 70 7e-11
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 65 3e-09
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 7e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 9e-07
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 1e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 3e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 3e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 4e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 6e-05
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 50 8e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 1e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 2e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 3e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 4e-04
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 47 5e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 5e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.002
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.002
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.002
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.004
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.007
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.009
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.012
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 42 0.016
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.036
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.036
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.15
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.44
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.44
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.44
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 38 0.44
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.78
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 37 0.78
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.78
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 36 1.0
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 1.4
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 1.4
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.8
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 35 2.4
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 3.1
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 3.1
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 4.1
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 7.2
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 9.6
UniRef50_Q54GR7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 235 bits (576), Expect = 8e-61
Identities = 111/128 (86%), Positives = 118/128 (92%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 579
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 580 IGKPHTVP 603
IGKPHTVP
Sbjct: 174 IGKPHTVP 181
Score = 104 bits (249), Expect = 3e-21
Identities = 54/88 (61%), Positives = 59/88 (67%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPHM 787
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLG F K
Sbjct: 183 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF-AKATF 241
Query: 788 LPLPRHMPTSLLTCGGTSPLTKSPYSEF 871
+ + + TKSPY EF
Sbjct: 242 DAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 217 bits (529), Expect = 4e-55
Identities = 93/128 (72%), Positives = 117/128 (91%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 579
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 580 IGKPHTVP 603
+G PHTVP
Sbjct: 147 LGDPHTVP 154
Score = 95.5 bits (227), Expect = 2e-18
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +2
Query: 569 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
G + HT + KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGS
Sbjct: 144 GTALGDPHTVPV-KVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGS 202
Query: 749 TGTLGKFL 772
T TLG F+
Sbjct: 203 TKTLGNFV 210
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 208 bits (509), Expect = 1e-52
Identities = 100/121 (82%), Positives = 106/121 (87%)
Frame = +1
Query: 241 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 420
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 421 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 600
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 601 P 603
P
Sbjct: 121 P 121
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 195 bits (476), Expect = 1e-48
Identities = 87/131 (66%), Positives = 110/131 (83%)
Frame = +1
Query: 223 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 402
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 403 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 582
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 583 GKPHTVPWQGH 615
G+PHT+P + H
Sbjct: 165 GEPHTIPTKVH 175
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/65 (60%), Positives = 44/65 (67%)
Frame = +2
Query: 569 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
G E HT KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG
Sbjct: 161 GSKLGEPHTIPT-KVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGH 219
Query: 749 TGTLG 763
T TLG
Sbjct: 220 TRTLG 224
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 186 bits (454), Expect = 5e-46
Identities = 84/125 (67%), Positives = 104/125 (83%)
Frame = +1
Query: 226 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 405
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 406 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 585
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 586 KPHTV 600
+PH++
Sbjct: 150 QPHSL 154
Score = 82.2 bits (194), Expect = 2e-14
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL
Sbjct: 157 KTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTL 207
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 151 bits (365), Expect = 3e-35
Identities = 71/131 (54%), Positives = 91/131 (69%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 579
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 580 IGKPHTVPWQG 612
GKPHTV +G
Sbjct: 135 QGKPHTVSCKG 145
Score = 67.7 bits (158), Expect = 4e-10
Identities = 39/98 (39%), Positives = 55/98 (56%)
Frame = +2
Query: 578 RSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 757
+ + HT S K +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 135 QGKPHTVSC-KGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATST 193
Query: 758 LGKFLLKPHMLPLPRHMPTSLLTCGGTSPLTKSPYSEF 871
F K + L L P T +P EF
Sbjct: 194 TENF-AKASIAALEATSSMILPDQWEEKPRTLNPLLEF 230
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 5e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGL 477
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 146 bits (354), Expect = 6e-34
Identities = 74/95 (77%), Positives = 80/95 (84%), Gaps = 3/95 (3%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 550 PVRRGYWGNKIGKPHTVPWQ--GH-RQVWFCNSPA 645
P+R+GYWGNKIGKP+TVP + GH V C PA
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPA 142
Score = 94.3 bits (224), Expect = 4e-18
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPHM 787
KVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCYTSAR T +LG F K
Sbjct: 127 KVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCYTSARDCTASLGNF-AKATF 185
Query: 788 LPLPRHMPTSLLTCGGTSPLTKSPYSEF 871
+ + + TKSPY EF
Sbjct: 186 DTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 129 bits (311), Expect = 1e-28
Identities = 74/170 (43%), Positives = 100/170 (58%), Gaps = 2/170 (1%)
Frame = +1
Query: 229 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 408
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 409 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNKI 582
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+ L + ++ G +
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQELCNLNQCQTQFDSSQKRILGKQD 179
Query: 583 GKPHTVPWQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLLH 732
P Q R+ S S YW E ++GW LLH
Sbjct: 180 RLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLLH 229
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 125 bits (301), Expect = 2e-27
Identities = 76/163 (46%), Positives = 90/163 (55%)
Frame = +1
Query: 280 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 459
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 460 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPWQGHRQVWFCNS 639
NG+ G RG L +R PH P QG R + C
Sbjct: 62 NGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHR-PLQGDRPLRLCAG 120
Query: 640 PADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGEI 768
+W+ + + + EA+ D W LLHLS + H G++
Sbjct: 121 ALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQL 163
Score = 37.5 bits (83), Expect = 0.44
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 453 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPL 605
R Y EV QG H R ++P + ++RLLG QDR+A HRPL
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPL 109
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 4e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 400 KQTRAGQRTRFK 435
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 104 bits (249), Expect = 3e-21
Identities = 54/88 (61%), Positives = 59/88 (67%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPHM 787
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLG F K
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF-AKATF 183
Query: 788 LPLPRHMPTSLLTCGGTSPLTKSPYSEF 871
+ + + TKSPY EF
Sbjct: 184 DAISKTYSYLTPDLWKETVFTKSPYQEF 211
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 114 bits (275), Expect = 2e-24
Identities = 67/119 (56%), Positives = 80/119 (67%)
Frame = +1
Query: 244 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 423
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 424 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 600
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTV 159
Score = 70.5 bits (165), Expect = 5e-11
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +2
Query: 569 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 745
G S+ HT L KVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 150 GSKTSKPHTV-LCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 110 bits (264), Expect = 5e-23
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +1
Query: 421 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 600
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 601 P 603
P
Sbjct: 121 P 121
Score = 99.5 bits (237), Expect = 1e-19
Identities = 48/72 (66%), Positives = 54/72 (75%)
Frame = +2
Query: 605 GKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPH 784
GKVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G P
Sbjct: 122 GKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTL---PR 178
Query: 785 MLPLPRHMPTSL 820
+L + PT++
Sbjct: 179 LLLMRSPRPTAI 190
Score = 33.5 bits (73), Expect = 7.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 226 DQKEWVPVTKLGRLVREGKI 285
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 7e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 400 KQTRAGQRTRFK 435
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 89.8 bits (213), Expect = 8e-17
Identities = 50/88 (56%), Positives = 55/88 (62%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPHM 787
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLG F K
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNF-AKATF 182
Query: 788 LPLPRHMPTSLLTCGGTSPLTKSPYSEF 871
+ + + TKSPY EF
Sbjct: 183 DAISKIYSYLTPDLWKETVFTKSPYQEF 210
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 108 bits (260), Expect = 2e-22
Identities = 57/126 (45%), Positives = 82/126 (65%)
Frame = -3
Query: 597 GVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCAL 418
GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L
Sbjct: 23 GVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTL 82
Query: 417 SGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFGDRNP 238
+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ + G NP
Sbjct: 83 TGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQLGHWNP 142
Query: 237 LFLVFL 220
VFL
Sbjct: 143 FLRVFL 148
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 107 bits (257), Expect = 4e-22
Identities = 54/128 (42%), Positives = 86/128 (67%), Gaps = 2/128 (1%)
Frame = +1
Query: 232 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 411
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 412 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 585
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRR G W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 586 KPHTVPWQ 609
+PH++P++
Sbjct: 130 EPHSLPFK 137
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFL 772
KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T F+
Sbjct: 137 KVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENFV 191
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 107 bits (256), Expect = 5e-22
Identities = 51/127 (40%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +1
Query: 232 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 411
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 412 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIG 585
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++R G W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 586 KPHTVPW 606
KPHT+P+
Sbjct: 122 KPHTLPF 128
Score = 50.4 bits (115), Expect = 6e-05
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLL 775
V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T + L
Sbjct: 130 VNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVNYAL 184
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 106 bits (254), Expect = 8e-22
Identities = 55/131 (41%), Positives = 84/131 (64%), Gaps = 2/131 (1%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVR--RGYWG 573
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 574 NKIGKPHTVPW 606
G PH++P+
Sbjct: 129 CGCGSPHSIPF 139
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +2
Query: 617 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKF 769
G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T T F
Sbjct: 143 GACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTRTTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 101 bits (243), Expect = 2e-20
Identities = 55/130 (42%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Frame = +1
Query: 235 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 402
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 403 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGN 576
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++R G W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 577 KIGKPHTVPW 606
+ +PH+VP+
Sbjct: 134 RCRRPHSVPF 143
Score = 58.0 bits (134), Expect = 3e-07
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKF 769
V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T F
Sbjct: 145 VEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRTTVNF 197
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 97.9 bits (233), Expect = 3e-19
Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
Frame = +1
Query: 238 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 417
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 418 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKP 591
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V R G W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 592 HTV 600
HTV
Sbjct: 126 HTV 128
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +2
Query: 590 HTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKF 769
HT +L + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T F
Sbjct: 126 HTVAL-RTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 92.7 bits (220), Expect = 1e-17
Identities = 53/130 (40%), Positives = 83/130 (63%), Gaps = 2/130 (1%)
Frame = -3
Query: 609 LPRDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLE 430
L GV L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE
Sbjct: 100 LGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLE 159
Query: 429 TCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFG 250
+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R Q + + D + +++ + G
Sbjct: 160 SGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLG 218
Query: 249 DRNP--LFLV 226
+ NP FLV
Sbjct: 219 NWNPTLFFLV 228
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Frame = +1
Query: 226 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 405
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 406 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 579
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 580 IGKPHTVPWQ 609
+ H+VP++
Sbjct: 161 CDQKHSVPFK 170
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/51 (54%), Positives = 41/51 (80%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 170 KVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 90.6 bits (215), Expect = 5e-17
Identities = 47/109 (43%), Positives = 68/109 (62%)
Frame = +1
Query: 238 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 417
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 418 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 564
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRG 165
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/50 (46%), Positives = 36/50 (72%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 757
K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T
Sbjct: 182 KAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRT 231
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 90.2 bits (214), Expect = 6e-17
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 15/141 (10%)
Frame = +1
Query: 232 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 396
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 397 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 552
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 553 VRR--GYWGNKIGKPHTVPWQ 609
V R G W G PH++P+Q
Sbjct: 124 VARGCGSWECACGAPHSIPYQ 144
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 757
+V GK GSV V L PAP+G GIV+ KK+ ++AG++D + + G T T
Sbjct: 144 QVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVWVRSFGKTKT 193
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 2e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +1
Query: 268 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 447
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 448 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 546
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 87.8 bits (208), Expect = 3e-16
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 2/115 (1%)
Frame = +1
Query: 265 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 444
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 445 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVP 603
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVP 114
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 757
K+TG+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T
Sbjct: 116 KITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRT 165
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 86.6 bits (205), Expect = 7e-16
Identities = 59/118 (50%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Frame = +1
Query: 241 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 420
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 421 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKP 591
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP 106
Score = 38.7 bits (86), Expect = 0.19
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 671 IVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 763
IVS VP+KL+ A + CYTSAR T TLG
Sbjct: 128 IVSVLVPRKLMLRASIDSCYTSARSYTVTLG 158
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 86.2 bits (204), Expect = 1e-15
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +1
Query: 226 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 405
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 406 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNK 579
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 580 IGKPHTVPWQ 609
+ H+VP++
Sbjct: 142 CDQKHSVPFK 151
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/50 (52%), Positives = 39/50 (78%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 757
KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 151 KVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 85.0 bits (201), Expect = 2e-15
Identities = 58/128 (45%), Positives = 70/128 (54%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 399
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 400 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 579
QRTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 -----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 580 IGKPHTVP 603
IG PHT+P
Sbjct: 126 IGNPHTIP 133
Score = 39.1 bits (87), Expect = 0.15
Identities = 26/65 (40%), Positives = 31/65 (47%)
Frame = +2
Query: 524 LSLLSCLFYQFEEVTGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 703
++LLS LF G HT + V V L APRGTG VSA VPKKL
Sbjct: 108 ITLLSFLFSTQTGYKGNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLP 167
Query: 704 QMAGV 718
+A +
Sbjct: 168 LLASI 172
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 244 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 423
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 424 TRFKAFVAIGDNNGHIGL 477
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 84.2 bits (199), Expect = 4e-15
Identities = 54/125 (43%), Positives = 72/125 (57%)
Frame = +1
Query: 229 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 408
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWE----------HPLIKQT 100
Query: 409 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 588
Q+TRFKA V +G + GH+ LG+K S EV AIILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEV------AIILAKLSIIPVETATGGKRL-E 152
Query: 589 PHTVP 603
PH VP
Sbjct: 153 PHMVP 157
Score = 77.8 bits (183), Expect = 3e-13
Identities = 45/85 (52%), Positives = 51/85 (60%)
Frame = +2
Query: 515 EALLSLLSCLFYQFEEVTGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPK 694
E + L E TG R E H +VTG+CGS+ V LIPAPRGTG VSAPVP
Sbjct: 129 EVAIILAKLSIIPVETATGGKRLEPHMVPC-RVTGRCGSLLVHLIPAPRGTGTVSAPVP- 186
Query: 695 KLLQMAGVQDCYTSARGSTGTLGKF 769
KLL MAG+ D +SA G T TLG F
Sbjct: 187 KLLMMAGIDDS-SSASGCTATLGNF 210
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 81.4 bits (192), Expect = 3e-14
Identities = 40/56 (71%), Positives = 42/56 (75%)
Frame = +2
Query: 602 LGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKF 769
L KVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T +L F
Sbjct: 17 LCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCTASLDYF 72
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 79.8 bits (188), Expect = 8e-14
Identities = 42/74 (56%), Positives = 46/74 (62%)
Frame = +2
Query: 650 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFLLKPHMLPLPRHMPTSLLTC 829
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLG F K + +
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNF-AKATFDAISKTYSYLTPDL 59
Query: 830 GGTSPLTKSPYSEF 871
+ TKSPY EF
Sbjct: 60 WKETVFTKSPYQEF 73
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/106 (33%), Positives = 67/106 (63%)
Frame = +1
Query: 292 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 471
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 472 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPWQ 609
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ ++
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYK 189
Score = 53.2 bits (122), Expect = 8e-06
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 751
K +GK GSV V + PAP+GTGIV++ +L+++G++DC+T + G T
Sbjct: 189 KTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCFTKSFGRT 236
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 77.4 bits (182), Expect = 4e-13
Identities = 43/86 (50%), Positives = 55/86 (63%)
Frame = +1
Query: 343 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 522
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 523 IILAKLSVLPVRRGYWGNKIGKPHTV 600
IIL + S+ G+ GNKI KPHTV
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTV 80
Score = 54.8 bits (126), Expect = 3e-06
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +2
Query: 581 SESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
++ HT S +VT SV V I APRGT I+SAPVPKKLL+MA + D + ARG T L
Sbjct: 75 AKPHTVSC-RVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDDGDSLARGCTAIL 133
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +1
Query: 280 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 459
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 460 NGHIGLGVKCSKEVATAIRGAIIL 531
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 71.3 bits (167), Expect = 3e-11
Identities = 49/100 (49%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +2
Query: 569 GVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
G TR T KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR
Sbjct: 49 GETRLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCY 108
Query: 749 TGTLGKFLLKPHMLPLP---RHMPTSLLTCGGTSPLTKSP 859
T TL F KP + + R++ TS L C L SP
Sbjct: 109 TATLYNF-SKPTIEVISKTYRYLTTSQL-CSPNLLLRNSP 146
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 397 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 540
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 70.1 bits (164), Expect = 7e-11
Identities = 47/96 (48%), Positives = 56/96 (58%)
Frame = +1
Query: 226 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 405
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 406 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 513
T R FK FV+I D + H+ L KCSK+ ATAI
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI 146
Score = 70.1 bits (164), Expect = 7e-11
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = +2
Query: 566 TGVTRSESHTPSLGKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 745
T TR S T S KVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG
Sbjct: 153 TRETRLGSLTVSC-KVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARG 209
Query: 746 STGTLGKF 769
T TL F
Sbjct: 210 CTATLDNF 217
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 64.9 bits (151), Expect = 3e-09
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = -3
Query: 762 PKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLPRDGVWLS 583
PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL
Sbjct: 14 PKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITL-CGLCGAC 72
Query: 582 DLVTPVTSSNW*NRQLSKDNSASNGSGDFLAA 487
L+ PV S++ N +L + +++ +G G+ L A
Sbjct: 73 CLLPPVASTHRDNGKLGQSDNSLDGRGNLLGA 104
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 220 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 327
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 7e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +1
Query: 355 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 534
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 535 KLSVL--PVRRGY 567
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 9e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 238 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 351
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 544 VLPV 555
++ V
Sbjct: 72 LISV 75
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
++ G+ GS V + PA GTG++S + +L++AGV D T + GS
Sbjct: 85 EIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGS 131
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 3e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 361 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 540
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 541 SVLPVRR 561
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
V G+ G+ V L+PAP GTGI++ + ++++AG D YT +RG+ +
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIYTKSRGANAPM 173
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 343 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 522
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 523 IILAKLSVLPV 555
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -1
Query: 386 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 225
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 6e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 358 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 537
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 538 LSVLPV 555
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 50.0 bits (114), Expect = 8e-05
Identities = 44/127 (34%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +1
Query: 238 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 417
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 418 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 588
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 589 PHTVPWQ 609
P P Q
Sbjct: 141 PSVCPMQ 147
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 544 VLPVR 558
+ V+
Sbjct: 138 MYKVK 142
Score = 39.9 bits (89), Expect = 0.083
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
+V GK G+ V + PAP+GTG+++ K +L++ G +D Y+ G +L
Sbjct: 152 EVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSL 202
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 550 PV 555
+
Sbjct: 71 KI 72
Score = 43.2 bits (97), Expect = 0.009
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
++ GK G+ T+ + PA GTG+++ +++L++ GV D T +GS
Sbjct: 82 EIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS 128
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 550 PV 555
V
Sbjct: 77 EV 78
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
+V G+ + V L PA GTGI++ + ++++AG+Q+ T + GST L
Sbjct: 88 EVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPL 138
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +1
Query: 349 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 528
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 529 LAKLSVLPV 555
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 745
+V G G+ V + PA GTG+++ + ++++AG+ D Y + G
Sbjct: 116 EVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 550 --PVRRG 564
PV G
Sbjct: 79 TVPVENG 85
Score = 34.7 bits (76), Expect = 3.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 90 EIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/37 (51%), Positives = 29/37 (78%)
Frame = +2
Query: 662 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGKFL 772
G+ +V+ VPKK+L+ AG++D +TS+RGST TL F+
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFV 38
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 5e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 550 PV 555
V
Sbjct: 209 QV 210
Score = 35.1 bits (77), Expect = 2.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 617 GKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
G G+ V L PA GTG+++ + +L+MAGV++ GS L
Sbjct: 224 GDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNAL 271
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 522
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 550 PV 555
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 355 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 534
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 535 KLSVL--PVRRG 564
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +1
Query: 355 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 534
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 535 KLSVLPVRR 561
K + V R
Sbjct: 102 KKHMFSVPR 110
Score = 33.5 bits (73), Expect = 7.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
V G + TV L PA GTG+++ + +++ AG+ D T + GS
Sbjct: 119 VQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAGITDVLTKSMGS 164
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 543
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 544 VLPVRRG 564
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 44.4 bits (100), Expect = 0.004
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +1
Query: 367 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 546
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 547 LPVRRGYWGNKIGKPHTV 600
V+ + G+ I PH V
Sbjct: 91 --VKINFKGHTI--PHEV 104
Score = 37.9 bits (84), Expect = 0.34
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 751
+V GK S V L P+ GTGI++ + +++ AG+QD T + GS+
Sbjct: 103 EVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDVLTKSWGSS 150
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.007
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 550 PV 555
V
Sbjct: 128 RV 129
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
++G G+ V L PA GTG+++ + +L++AG+++ + GS L
Sbjct: 141 MSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVLAKSLGSKSPL 190
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 544 VLPV 555
V+ V
Sbjct: 88 VIRV 91
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 751
V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 102 VIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.012
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 550 PV 555
V
Sbjct: 104 RV 105
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 611 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 760
V G+ + V L PA GTG+++ + +L+ AGV D + GS +
Sbjct: 116 VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDILAKSLGSDNAI 165
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 42.3 bits (95), Expect = 0.016
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 584 ESHTPSL-GKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 745
E H S+ +V G+ G+ V L PAP+GTGI++ + ++++AG D YT G
Sbjct: 130 EIHKGSIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIYTKNLG 184
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.036
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 550 PV 555
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.036
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 537
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.15
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -3
Query: 465 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 289
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 288 VDFSFANKTAEFGDRNPLFLVFL 220
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.44
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 394 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 561
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.44
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 516
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.44
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 544 VLPVRR 561
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.5 bits (83), Expect = 0.44
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 544 VLPVRRGYWGNKIGKPHTV 600
++ + G+ I PH V
Sbjct: 73 LITI-ESLEGDSI--PHEV 88
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.59
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 525 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 427
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.78
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 364 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 543
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 544 VLPV 555
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 36.7 bits (81), Expect = 0.78
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 620 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 751
K G+ + + PAP GTGIV+ +K +M GV D + GS+
Sbjct: 89 KLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSS 132
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.78
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 370 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 550 PV 555
V
Sbjct: 151 RV 152
Score = 35.9 bits (79), Expect = 1.4
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 638 VRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
V L PAP+G GI+++ + ++++AG D YT + GS
Sbjct: 173 VMLKPAPKGKGIIASNSVRAVVELAGYTDIYTKSYGS 209
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 36.3 bits (80), Expect = 1.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 748
+V G+ G+ V LIPA GTGI++ + + + G+ D T + G+
Sbjct: 94 QVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHDILTKSYGT 140
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 367 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 516
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 608 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 751
+V K G V L PA GTG+++ + +L++AGV+D + G++
Sbjct: 88 EVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDVLAKSLGAS 135
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 376 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 555
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 394 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 561
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 35.1 bits (77), Expect = 2.4
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 563 VTGVTRSESHTPSLGKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSA 739
+T V R E HT +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 60 LTYVQRFEDHT-IYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKI 117
Query: 740 RGS 748
GS
Sbjct: 118 HGS 120
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 361 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 540
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 541 SVLPVRR 561
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 3.1
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 352 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 531
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 532 AKLSVL 549
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 3.1
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 349 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 513
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 4.1
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 361 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 540
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 541 SVLPVRR 561
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 7.2
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 286 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 459
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 460 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 549
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 433 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 585
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_Q54GR7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1504
Score = 33.1 bits (72), Expect = 9.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 670 SSTTRGRNQPDCYRTTLAGDLAKGRCVAFRSC 575
+STT G + PDC + + G ++G CVA +C
Sbjct: 1148 TSTTTGTSGPDCSKLSNCGGSSQGNCVADNTC 1179
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 9.6
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 376 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 522
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,844,498
Number of Sequences: 1657284
Number of extensions: 19535602
Number of successful extensions: 56444
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 52841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56242
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78702453312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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